Gene Rmet_5501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5501 
Symbol 
ID4042362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2244418 
End bp2245212 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content58% 
IMG OID637980919 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_587629 
Protein GI94314420 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACTC TCGACTTCGA AGTAGTGAAC AACGTTGGCT GGATTCGCAT GAATCGGGCC 
GCGAAGCACA ATCCGTTTGA TGCGGAGCTT CGCGCCGACC TGATGACCGT CTTGGAGCGT
GTTCGAGACG ATGCTGACAT CAGGGTCCTC GTGCTTACGA GCCATCCTGG CTCATTCTGC
GCGGGAGGGA ATCTCCATGT TCTTCGAGAC AACCTCGACT CTGGCCCCGC CTACTGGCAG
CAGCGCATCA AGACCGGCCT TCGATTCATC CACGATATGT TGAATCTCGG TCGCCCAGTT
ATTGCTGCCG TAGACGGCCC GGCATTCGGA GCTGGATTCG CGTTGTCTCT GACAGCAGAT
ATCGTGCTGG CAAGTCCTCG TGCACGCTTC TCTATGGCCT ACCTCCGCCT TGGTCTGGTA
CCGGATCTCG GCGCGCTGTA CCTTCTTCCC CGAGCAGTTG GACTGCAACG AGCCAAGGAG
TTGATGTTCT CAACCCGAGA ACTGGACGCG GAAGAGGCTC ATCGCCTGGG GCTTGTGATG
GAAGTACATG AGAGCGAGGC ACTTGAGCAG CGTGCTCGAG AAATTGCCGA GAGCCTGGTC
CAAGCTGCCC CGACCGCCCT CGCACTGACG AAGGCGGCGC TGAACGTTTC GTTGGATTCC
GATGAGCAAA CGATGTTTAG TCTCGAGGCG GCCAGCCAAG CTGCAGCTTT CTCGACGAAG
GAACCGCGCG CTGCAATCGA AGCACTCCTG TCCAAACAAC CTCCTCCGTT TCGCGGATTT
CCACGGCGTT CGTAA
 
Protein sequence
MDTLDFEVVN NVGWIRMNRA AKHNPFDAEL RADLMTVLER VRDDADIRVL VLTSHPGSFC 
AGGNLHVLRD NLDSGPAYWQ QRIKTGLRFI HDMLNLGRPV IAAVDGPAFG AGFALSLTAD
IVLASPRARF SMAYLRLGLV PDLGALYLLP RAVGLQRAKE LMFSTRELDA EEAHRLGLVM
EVHESEALEQ RAREIAESLV QAAPTALALT KAALNVSLDS DEQTMFSLEA ASQAAAFSTK
EPRAAIEALL SKQPPPFRGF PRRS