Gene Rmet_5350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5350 
Symbol 
ID4042211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2070481 
End bp2071671 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID637980768 
Producthypothetical protein 
Protein accessionYP_587478 
Protein GI94314269 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.723811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATCCA GCCTGCTGGC ACGCAAGCCC GGCCTCGACA TCGCCATCAT CGACCCGGCC 
GACATCCACT ATTACCAGCC GGGCTGGACA CTGGTGGGCG GCGGCGTGTT CGAACCCGCG
CATACCGCGC GCACGATGGC ATCGGTCCTG CCGCGCGGTG TGTCGTGGAT CAAGGCCACT
GTCACGGGAT TCGAACCGGA AGCCAATGCG GTGATGCTGG AAGGCAACCG CGTGGTCAAG
TACGAGCATC TGGTGGTTTG CCCCGGCCTG AAGCTGGACT GGGATGCCAT CGAAGGCCTG
CCGCAGGCGC TCGGCCGCAA CGGCGTCACG TCCAACTATC GCTATGACCT GGCGCCATAT
ACCTGGAAGC TCGTGCAGGA ACTCGTGCGC AAGCAAGGCG GCAAGGCACT GTTCTCTCAA
CCCCCGATGC CGATCAAGTG CGCGGGCGCG CCGCAAAAGG CCATGTACCT CTCGGCCGAT
GCGTGGCGCC GTGCCGGCGT GCTCGATCGC GTGGACATCC AGTTCTGCAA CGCGGGCAAT
GTGCTGTTCG GCGTGGCGGA CTACGTGCCC GCGCTGATGG AGTATGTCGA ACGCTATGCC
ATCGACCTGA ACTTCGGCGA AACGCTGGTC GCCGTCGACG GCCCGGCACG TTGCGCCACA
TTCCGCCGCG CCAACGCCGA TGGCACGACG GCACTGGTAA CACGCGAGTT CGACATGCTG
CATGCCGTAC CGCCGCAGAA GGCGCCTGAC TTCATCCGTT CGAGCCCACT GGCCGACGCC
GCCGGCTGGA TCGATGTGGA CCCCGCCACG CTGCGCCATA CGCGCTTCGG CAATATCTTC
GGTCTCGGCG ACGCCGGCAA CACGACCAAT GCGAAGACGG CCGCCGCCGC CCGCAAGCAG
GCGCCAGTGG TAGCGCACAA CGTGCTGGCC GAGCGCGGCT CGGCACGGGG TGAAGCGCGC
TATGACGGCT ATGGTTCGTG CCCGCTCACC GTCGAACGCG GCAAGATCGT GCTGGCCGAG
TTCACGTACG GCGGCAAGGT CGCGCCGACA TTCCCGAGCT GGTTCATCGA AGGCAAGCGC
CCCTCGCGCA TGGCATGGTG GCTCAAGGAG CGCATCCTGC CGCCGCTTTA CTGGCGCGGG
ATGCTCAAGG GCCGCGAATG GCTCGCGAAT CCCGAACTTC AGGGCCGCTA A
 
Protein sequence
MASSLLARKP GLDIAIIDPA DIHYYQPGWT LVGGGVFEPA HTARTMASVL PRGVSWIKAT 
VTGFEPEANA VMLEGNRVVK YEHLVVCPGL KLDWDAIEGL PQALGRNGVT SNYRYDLAPY
TWKLVQELVR KQGGKALFSQ PPMPIKCAGA PQKAMYLSAD AWRRAGVLDR VDIQFCNAGN
VLFGVADYVP ALMEYVERYA IDLNFGETLV AVDGPARCAT FRRANADGTT ALVTREFDML
HAVPPQKAPD FIRSSPLADA AGWIDVDPAT LRHTRFGNIF GLGDAGNTTN AKTAAAARKQ
APVVAHNVLA ERGSARGEAR YDGYGSCPLT VERGKIVLAE FTYGGKVAPT FPSWFIEGKR
PSRMAWWLKE RILPPLYWRG MLKGREWLAN PELQGR