| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5347 |
|---|
| Symbol | |
|---|
| ID | 4042208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 2065985 |
|---|
| End bp | 2066803 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637980765 |
|---|
| Product | putative cytochrome c |
|---|
| Protein accession | YP_587475 |
|---|
| Protein GI | 94314266 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3258] Cytochrome c |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.118303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGGA CAAAACTGGG TGTTCTGGCG TTTGTCGCCA TGGCGGCATG CGCGCCGTTC
GTATCGCACG CGGAGAAGAC CGTGCCCCTG GTCGTTCCCG ACGAGGCGTC GATTCCAACT
GGGCCGATCG GCGATGCTGT CCGCCGTGGC AAGCAGTTGC TCACCGATAC CCACAAGCAG
TTGCCAAAGA ACGTCGGCAA CGGGCTGAAC TGCACGAACT GCCACCTGAG CGGCGGCACG
ACGGCCTATG CCTCGCCTTG GGTGGGGCTG TCGGGCGCGT TCCCGGAATA CCGCTCGCGC
AGCGGCAAGC TGATCTCGCT GCAGGAGCGC GTCAACGACT GCTTCCAGCG TTCGATGAAC
GGCAAGCCGC TGGCGTTCGA TTCCGCCGAG ATGAACGCGA TCATGGCCTA TATGAAGTGG
CTCTCCACCG GCGTACCGGT CGGCACCAAC GTCACCGGCC GAGGCTTCGA GAAGATCGAC
ACCGCGCTCG TGCCGAACCG CGAGCACGGC AAGGCCGTCT ACGCGGCGCA ATGCGCGTCG
TGCCACGGCG CCGATGGCCA GGGCATGAAG AACCCTCAGG GCGGCTACGT GTTCCCGCCG
GTCTGGGGCA AGGACTCGTT CAATATCGGC GCGGGCATGG CGCGGATGTA CACGGCTGCG
GCCTTCGTCA AGCACAACAT GCCGTTAGGC CAGGGTGGCA CGCTGTCGGC GCAGGATGCG
CTCGACGTGT CGGCATACTT CACGGCGCAG CCGCGCCCGG ACTACGCCGC GCGTGCGAAC
GACTGGCCCA AGGGCGACAA GCCGAAGGAC GCGCGCTGA
|
|---|
| Protein sequence | MNRTKLGVLA FVAMAACAPF VSHAEKTVPL VVPDEASIPT GPIGDAVRRG KQLLTDTHKQ
LPKNVGNGLN CTNCHLSGGT TAYASPWVGL SGAFPEYRSR SGKLISLQER VNDCFQRSMN
GKPLAFDSAE MNAIMAYMKW LSTGVPVGTN VTGRGFEKID TALVPNREHG KAVYAAQCAS
CHGADGQGMK NPQGGYVFPP VWGKDSFNIG AGMARMYTAA AFVKHNMPLG QGGTLSAQDA
LDVSAYFTAQ PRPDYAARAN DWPKGDKPKD AR
|
|---|
| |