Gene Rmet_5337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5337 
Symbol 
ID4042198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2048727 
End bp2049386 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID637980755 
Producthypothetical protein 
Protein accessionYP_587465 
Protein GI94314256 
COG category[S] Function unknown 
COG ID[COG4380] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.232153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTC GAATCCTGAC CTATATCGCG GGCCTTGGTG CGGTGACGCT GTTCGCAGGC 
TGTGCCGTGC CGACCAAGCA GATTGACTAC TCGGCGTACA AGGCCAGCCG GCCGCGTTCG
ATCGTGGTGC TGCCGCCGTT GAACGAGTCG CCGGATATCA ATGCAACCTA CGCGATGCTG
GCGCAGACCA CGGCGCCGTT GGCCGAATCG GGCTACTACG TGCTGCCCGT GGCGCTGGTT
GACGAGACGT TCCGCCAGAA CGGGTTGACC GTGCCGGGTG ACATCCACGC CGTTCCGGTG
GCCAAGCTGC GCGAGATCTT CGGTGCCGAC GCCGCGCTAT ATGTGACCGT GAGCGAGTAC
GGTTCGAAGT ATCAGGTGCT TAGCAGCGTA ACGCGCGTGG CCGCGAGCGC GAAGTTGGTG
GATCTGAAGA CCGGCGACGC GCTGTGGAGC GGTTCGGCCG CCGCGGCCAC CGACGACTCC
GGTAATGCCG GCGGCGGGCT GGTTGGCGCG CTGATTGCCG CGGCCGTTGC CCAGGTGATC
AACCACACGG TGGATCGCAG CTACGGCGTG GCTGGCGCTG CGAGCGACCG GTTGCTGTCG
GCGGGTCAGC CCACCGGTAT TCTGTACGGG CCGCGTTCGC CGAAATACCA GTCGGACTAA
 
Protein sequence
MMRRILTYIA GLGAVTLFAG CAVPTKQIDY SAYKASRPRS IVVLPPLNES PDINATYAML 
AQTTAPLAES GYYVLPVALV DETFRQNGLT VPGDIHAVPV AKLREIFGAD AALYVTVSEY
GSKYQVLSSV TRVAASAKLV DLKTGDALWS GSAAAATDDS GNAGGGLVGA LIAAAVAQVI
NHTVDRSYGV AGAASDRLLS AGQPTGILYG PRSPKYQSD