Gene Rmet_5307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5307 
Symbol 
ID4042168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2010106 
End bp2011311 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content68% 
IMG OID637980725 
Productputative heme/copper membrane protein 
Protein accessionYP_587435 
Protein GI94314226 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3213] Uncharacterized protein involved in response to NO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0853882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0678899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCC TGCTGCAAAT CTCCCCACCC TCCCGCTCCC AGGCCGGCTA TCGCGGATTG 
CCCGTGCTCG CGCTGGGTTT TCGCCCGTTT TATCTGCTGG CCGCCGCATT CGGCGCCCTG
GCCGTGGTGG CCTGGGTCGC CATGTACCTT GGCTGGTGGA CGCCGGCCAG CCAGCCGTGG
GCCGGCACCA TGGTCTGGCA CGCGCATGAG ATGGTGTTTG GTTTCTCGGC AGCGGTAGTG
GTCGGCTTTC TGTTCACCGC CGGCAAGAAC TGGACCGGAC TGCAAACGCC GCAGGGGGCC
TGGCTCGGCG CATTGGTCGG CGTGTGGCTG CTGGCCCGTG TGCTGATGTG GAGCGGCCCG
GCATGGGCGG CCATCACGGT CGATGTGCTG TTTCTGCCAC TGTGCAGCCT GAGCTTCTAC
CGCATCCTCC GGCGCGCCAA GAGCCAGCGC AACTATGGCC TGGCCATCGC GCTCGGCGTG
ATGGGGGCCT TCAACATCGG CTTCCACGCC GCCGTGCTGA GCGGCCGGAT CGACTGGGCA
CTGCACGCGT CAGAAGCCGC GATCGGGCTC GTCGCCATCT TTGTCACGGT GATCGGTGGC
CGCGTGATTC CAATGTTCAC CGCCAATGCG ATTCCCGGTA TCCGCATTCG CCGCTGGGCG
TGGGTCGAAC GCTGCGTGAT CCCGCTGACG CTGCTGGCGG CGCTGGCCAG CGCAGTGCTG
GCACCTGCGA TCATCCTGGC GCCGCTGGCG CTCGCCGCCG CCATCGCGCA GGGCGTCCGT
CTGGCCGGAT GGGATTCGCT GCGCACGGTA CGCAAGCCGA TCGTCAGCAT CCTGCACGCC
GCCTATGCAT TCCTGCCGAT AGGTTTCCTC TTGATCGCCG CAGCGTCGCT GGGCTGGGTG
GACCGTTCCA CCGCGCTCCA TGCGCTGACC GTCGGCGTGA TCGGGGGCGC CATCATCGCG
ATGGTGACAC GCACGGCGCT GGGCCATTCC GGCCGCCGCC TGGAAACGGG CCGCATGGAA
CACCTGGCCT ACCTGTGCAT GGCGCTGGCC GCCATTGCGC GGGTGGCCGG TCCGATCGCC
CTGCCGGCGC TGAAGCCCGA GGCCATCGCC GCGTCGGGCG TCCTGTGGGC GCTGTCCCTC
GTGCTCTACC TTGTCAAATA CACGCCTTAC CTGACGCGCG CACGCATCGA CGGCAAGGAG
GGTTGA
 
Protein sequence
MSVLLQISPP SRSQAGYRGL PVLALGFRPF YLLAAAFGAL AVVAWVAMYL GWWTPASQPW 
AGTMVWHAHE MVFGFSAAVV VGFLFTAGKN WTGLQTPQGA WLGALVGVWL LARVLMWSGP
AWAAITVDVL FLPLCSLSFY RILRRAKSQR NYGLAIALGV MGAFNIGFHA AVLSGRIDWA
LHASEAAIGL VAIFVTVIGG RVIPMFTANA IPGIRIRRWA WVERCVIPLT LLAALASAVL
APAIILAPLA LAAAIAQGVR LAGWDSLRTV RKPIVSILHA AYAFLPIGFL LIAAASLGWV
DRSTALHALT VGVIGGAIIA MVTRTALGHS GRRLETGRME HLAYLCMALA AIARVAGPIA
LPALKPEAIA ASGVLWALSL VLYLVKYTPY LTRARIDGKE G