Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5303 |
Symbol | fliR |
ID | 4042164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2004330 |
End bp | 2005115 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980721 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_587431 |
Protein GI | 94314222 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.114912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGAGG TCACCACCGC CCAGATGTAC GGCTGGATCG CCACCTTCCT GTGGCCGATG TTCCGGATGC TGGGGCTGAT CTCTTCCGCG CCGCTGCTCA GCGAATCGAC GATTCCCCGG CGTCTCAAGA TCCTGCTGGC AGCCGCTCTT TCGATAATCA TCTCCCCTAC GATCGGCAAT ATCCCCACCG TGCCGGTCTA CTCGCTCGAT GGCCTGCTGA TCGTCCTCAA CGAAGTCGGC ATCGGCTTGT CGATGGGCTT CGCAATGCGC CTGGTATTCG CCGCGGTGCA GATGGCAGGT GAAGTCATCG GCCTGCAGAT GGGTCTGTCG TTCGCGTCGT TCTACGATCG CGCGGCCGGC GGCCAGACCA TGGTGCTGTC ACGCTTCCTG AACATGGTGG CCATGCTGCT GTTCCTGGCG CTCGACGGTC ATCTGATGAT GCTGGCCGCG CTGATCGACA GCTTCCAGGG CCTGCCCATC TCCGGCGTGC CGCTCTCCGG GCACGGCTGG GGCGTGCTGG CTCGCGCGGG ATCGATGATC TTCTCCGCCG GTACGCTGCT CTCGCTGCCG ATGATCGCGG CGCTGCTGAC GATGAACCTG GCCATGGGCA TCCTGAACCG GGCCTCGCCG CAGCTTTCAA TCTTCGCCGT GGGCTTCCCC GTCACGCTGC TGGGCGGCAT GCTGGTCCTG GCGCTGGTGA TGCCGCACAT GGGCGCCTAC GTGCAGCACC TGATCGAAAG CGGCCTCCAG ACCGCCGCCA CCGTGCTCGA CCAGCTCGCG CCCTAG
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Protein sequence | MIEVTTAQMY GWIATFLWPM FRMLGLISSA PLLSESTIPR RLKILLAAAL SIIISPTIGN IPTVPVYSLD GLLIVLNEVG IGLSMGFAMR LVFAAVQMAG EVIGLQMGLS FASFYDRAAG GQTMVLSRFL NMVAMLLFLA LDGHLMMLAA LIDSFQGLPI SGVPLSGHGW GVLARAGSMI FSAGTLLSLP MIAALLTMNL AMGILNRASP QLSIFAVGFP VTLLGGMLVL ALVMPHMGAY VQHLIESGLQ TAATVLDQLA P
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