Gene Rmet_5282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5282 
Symbol 
ID4042143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1981345 
End bp1982349 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content60% 
IMG OID637980700 
Producthypothetical protein 
Protein accessionYP_587410 
Protein GI94314201 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.21823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCG CAATTTCCTA TCTGGCTGCG CAATTCTGCT TGCTCTTCAC ACTCGGGTGT 
CTGTCACCCG ACGGACTGGC GCAGGTCGCC CGGACCGAAG TCATTCCCGT ACCGACTGTC
ACCATGTCGG ACCAGGAATT TCTGGCCGGA GTCGAGGGCG GGCGGCCTGC AACGATTGCG
GGCGAACTTC GGCTCCCCAA GGCCGGGGCG GACCGGCTCC CACTGGTGAT TCTGCTGCAT
GGCTCAGGCG GCATCGGTAG TTCGGTGACC GACTGGGAGC AGGATCTTCT GGGGATGGGC
GTCGCGACGT TTGTCCTTGA CAGCTTTTCT GCCCGTGGCA TCACCAGCAC GATCAACGAC
CAGACTCAGC TACCTCGCCT GGCGCAAATG GAAGACGCCT TTCGCGCGCT CGCGATTCTT
TCAAGGCACC CGCGTATCGA CCCGACGAGA ATCATGCTCG TGGGTTTTTC GCGAGGCGGG
CAGAATGCGC TTTATGCAAG CCTGAAACGG TTTCACCGAT TGCACGCGTC ACCCGGAACC
GAGTTCGCGG CCTACGTCGC CTTCTATCCC GACTGCTCCT ATACGTATCG CGAAGACGAT
GACCTTGTTG CAAAGCCATT AAGAATTCTC CAGGGCAGCG CAGACAACTA CGACCCGGTT
GGCCCGTGCC GCGCATATGT CGATCGGCTA AAGGCGAAGG GTAACGATGC GATGTTGATC
GAGTATCCAA AGGCCAATCA TGCCTTCGAT TCGCGGGCGC TCGCGTCGGC CGTGCAGCTT
CCGCGCGCGC AAACAACGCG GCATTGCAGG ACGATGGAGT TGGAGAATGG GTTGCTGGTC
AACGCCCAGA CCAGCAAGCC TTTTACCTAC GATGACCCGT GCGTCGAGCG GGGCGTGACC
GTCGCCTATG ATGAGCAGGC AGCAAGGGAG GCGAGGCAGG CGCTTCACGA GTTGGTGATC
GCGGTGCTAA AGCCGGGTGC CGTCGCAACC GTAACGCGCC CGTGA
 
Protein sequence
MKSAISYLAA QFCLLFTLGC LSPDGLAQVA RTEVIPVPTV TMSDQEFLAG VEGGRPATIA 
GELRLPKAGA DRLPLVILLH GSGGIGSSVT DWEQDLLGMG VATFVLDSFS ARGITSTIND
QTQLPRLAQM EDAFRALAIL SRHPRIDPTR IMLVGFSRGG QNALYASLKR FHRLHASPGT
EFAAYVAFYP DCSYTYREDD DLVAKPLRIL QGSADNYDPV GPCRAYVDRL KAKGNDAMLI
EYPKANHAFD SRALASAVQL PRAQTTRHCR TMELENGLLV NAQTSKPFTY DDPCVERGVT
VAYDEQAARE ARQALHELVI AVLKPGAVAT VTRP