Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5282 |
Symbol | |
ID | 4042143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1981345 |
End bp | 1982349 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637980700 |
Product | hypothetical protein |
Protein accession | YP_587410 |
Protein GI | 94314201 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.21823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCG CAATTTCCTA TCTGGCTGCG CAATTCTGCT TGCTCTTCAC ACTCGGGTGT CTGTCACCCG ACGGACTGGC GCAGGTCGCC CGGACCGAAG TCATTCCCGT ACCGACTGTC ACCATGTCGG ACCAGGAATT TCTGGCCGGA GTCGAGGGCG GGCGGCCTGC AACGATTGCG GGCGAACTTC GGCTCCCCAA GGCCGGGGCG GACCGGCTCC CACTGGTGAT TCTGCTGCAT GGCTCAGGCG GCATCGGTAG TTCGGTGACC GACTGGGAGC AGGATCTTCT GGGGATGGGC GTCGCGACGT TTGTCCTTGA CAGCTTTTCT GCCCGTGGCA TCACCAGCAC GATCAACGAC CAGACTCAGC TACCTCGCCT GGCGCAAATG GAAGACGCCT TTCGCGCGCT CGCGATTCTT TCAAGGCACC CGCGTATCGA CCCGACGAGA ATCATGCTCG TGGGTTTTTC GCGAGGCGGG CAGAATGCGC TTTATGCAAG CCTGAAACGG TTTCACCGAT TGCACGCGTC ACCCGGAACC GAGTTCGCGG CCTACGTCGC CTTCTATCCC GACTGCTCCT ATACGTATCG CGAAGACGAT GACCTTGTTG CAAAGCCATT AAGAATTCTC CAGGGCAGCG CAGACAACTA CGACCCGGTT GGCCCGTGCC GCGCATATGT CGATCGGCTA AAGGCGAAGG GTAACGATGC GATGTTGATC GAGTATCCAA AGGCCAATCA TGCCTTCGAT TCGCGGGCGC TCGCGTCGGC CGTGCAGCTT CCGCGCGCGC AAACAACGCG GCATTGCAGG ACGATGGAGT TGGAGAATGG GTTGCTGGTC AACGCCCAGA CCAGCAAGCC TTTTACCTAC GATGACCCGT GCGTCGAGCG GGGCGTGACC GTCGCCTATG ATGAGCAGGC AGCAAGGGAG GCGAGGCAGG CGCTTCACGA GTTGGTGATC GCGGTGCTAA AGCCGGGTGC CGTCGCAACC GTAACGCGCC CGTGA
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Protein sequence | MKSAISYLAA QFCLLFTLGC LSPDGLAQVA RTEVIPVPTV TMSDQEFLAG VEGGRPATIA GELRLPKAGA DRLPLVILLH GSGGIGSSVT DWEQDLLGMG VATFVLDSFS ARGITSTIND QTQLPRLAQM EDAFRALAIL SRHPRIDPTR IMLVGFSRGG QNALYASLKR FHRLHASPGT EFAAYVAFYP DCSYTYREDD DLVAKPLRIL QGSADNYDPV GPCRAYVDRL KAKGNDAMLI EYPKANHAFD SRALASAVQL PRAQTTRHCR TMELENGLLV NAQTSKPFTY DDPCVERGVT VAYDEQAARE ARQALHELVI AVLKPGAVAT VTRP
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