| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5279 |
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| Symbol | |
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| ID | 4042140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1979051 |
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| End bp | 1979977 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637980697 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_587407 |
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| Protein GI | 94314198 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.328918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.21823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGC GGCAGTTGCG CTACTTCGTG CATGTGGTGG AGCTTGGCAG CATGGGGCAG
GCGGCCCAGC GACTGGGCGT CGTCACGTCC GCGTTGAGCC AGCAGATCAG CCGCCTCGAG
AGCGAGCTAT CCACGCGACT GCTGCAGCGC ACGTCGAGCG GCGTGGTGCC GACCGACGCG
GGTCTGGCCT TCTGGCGTCA GGCGCAACTG GCGCTGCGCC ACGCGGACGA TGCCGCGCGC
GCGGCGCGGA CGGCGCGGCT GTCGGGCCAC GTCAGCGTGG GCATGGCACC GAGCACGCTG
GCGGTGCTGG GGCCTCCGTT CATGGTCGCG ATGCGCGAGC GTTATCCCGA TATCCGTCTT
CATCTGGTCG AAAGCCTCTC CGGCAACCTG GCTTCGATGA TTGGCGCGCG CCAGCTTGAC
CTGGCCGTGC TGTTCCAGCT CGAAGCGGGT CAGCGCTGGA GCACCACGCC ATTGCTCGAA
GAGCGGCTTT TCCTGATCGC GCGCCCCGAT CAGCCCGGCT TGCCAGCGGC AAATGCGGTG
CGGCTCGAGG ACATCGGCGA CATCCCGCTG ATTCTGCCCA GCAGCGCGCA CGGTCTGCGT
GCCGTGCTGA ACGCGGCCGC GGCCCGTCAC CAGCGTGCGC TGAACGTGGT GGCCGAAATC
GACGGGCTGG CCGTACTGAT GGACGCCGTG CGCGCCGGCA TTGGCGCGAC GATTCAGCCT
GGCGCCGCCG TGGCGCGCCA TCTGGGCGAC CCGCTGGCGC TGATCGAGAT CGCCGATGCC
AGCGTCAGGC GTCCGAACCT GCTGGTCAGC CTGTCGGACG ACGAACTGTC GCCGGCCGGC
CTGGCAGCGC GAGGCGTGCT CGAATCAGTG GCCCGCCAAC TGGTCACGGC CGAACGCTGG
CCCGGCGCCA CCCTTCACAA ATCCTGA
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| Protein sequence | MELRQLRYFV HVVELGSMGQ AAQRLGVVTS ALSQQISRLE SELSTRLLQR TSSGVVPTDA
GLAFWRQAQL ALRHADDAAR AARTARLSGH VSVGMAPSTL AVLGPPFMVA MRERYPDIRL
HLVESLSGNL ASMIGARQLD LAVLFQLEAG QRWSTTPLLE ERLFLIARPD QPGLPAANAV
RLEDIGDIPL ILPSSAHGLR AVLNAAAARH QRALNVVAEI DGLAVLMDAV RAGIGATIQP
GAAVARHLGD PLALIEIADA SVRRPNLLVS LSDDELSPAG LAARGVLESV ARQLVTAERW
PGATLHKS
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