Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5254 |
Symbol | fliD2 |
ID | 4042115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1954045 |
End bp | 1955517 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637980672 |
Product | flagellar filament capping protein |
Protein accession | YP_587382 |
Protein GI | 94314173 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.782787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0469121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGA TCTCCAACCT CGGCGTCGGC TCCGGTCTCG ACCTGAGCAG CCTGCTCGAT CAGCTCACCA CGGCTGAACA GGCCCCGCTC ACCGCGATCA AGACCCAGCA GAGCAGCTAC CAGACCAAAC TGTCCGCGTA CGGCCAGTTG CAGAGCATGC TCGCGGCGTT CCAGGCTTCG GCCAACCAGT TGTCGAACCC CACGTTCTTC CAATCCACCA CGGCAAGCGC AAGCAACACC TCGGTACTGA GCGCCACCGG CAGCACCACT GCGGTGCCAG GCACCTACTC GGTCAACGTC ACGCAACTGG CGCAGTCGCA GTCGGTGGTT TCCACCGGAC AGGCATCGCA GACCACCGCC GTCGGCACCG GCACGATCCA TATCGATTTC GGTGCGATCA CGGGTGGCAC GCTGGACAGC AACCCGGCCA GCGCCACCTA CGGCAAGTAC ACCGGCGCCA CCTTCACTGC CAATAGCGGC TCCACCGGCG TCGACATCAC GATCGACAGC AGCAACAACA CGCTGCAGGG CGTTCGCGAC GCGATCAACA AGGCCAATGC CGGCGTCACA GCCAGCATCG TCAACGACGG TTCGGGCACG CCCTATCGCC TGGTCATCAG TTCCAACGCC ACCGGTGCCA CGAACAGCGT GCGCATGTCG GTGAATGAAA CCGATGGCGG CACCGGCCTC TCGGATCTGG CGGCATACGA TCCAGCCGGC ACGCAGAACA TGCAGCAGAC CATTGCGGCC CAGAACGCCC AGCTCACGGT CAACAACATC GCCGTCCAGA GCAAGGGAAA TTCCGTGGCG GACGCGGTGC CAGGCGTGGT CCTTAACCTG ACCCAGACCG GTACGAGCAG TGTGACGGTC CAGCGCGACA ACAGTTCGAT CGTCTCCGGC GTGCAGGCCT TCGTCGCGGC TTACAACAAC CTCCAGAACA CCGCTGCGTC GCTGTCGGCC TACGACCCGA GCACCAAGAC CGGTTCTCCC CTGACGGGCG ATTCCACGTT GAGCATCATC CAGTCCCAGA TGCGCAGCGT GATGAACACG CCGCAGTCGG GCAACGCGCT CACCACGCTG TCGCAGATCG GCATCTCGTT CCAGAACGAC GGCACGCTTG CTCTCGACAC CACCAAGCTG ACCTCGGCGC TGAACAGCAA CCCCGGCGCG GTTGCGGGGC TGTTCGGCAA CACCGACGGC GTGAGTGGCT ACGGCAACCA GATCAACAAG CTCGTCACGG GCCTGACCAG CAGCAACGGC GCGTTGACGA CGGCCACGGC CGGCATCAAC AACACGCTCA AGGATCTGAG CAATCAGTAC GATGAAACGC AGACCCGCGT CGACGCGGTC ATCGCCAACT ACAAGACGCA GTTCACGCAA CTCGACGTGA TCATGTCGCA GATGCAGAAC ACCAGTTCGT ACCTGACGCA GCAGTTCAGC GCCATGAACG GCACAAGCAG TAGCAAGAAG TAA
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Protein sequence | MTTISNLGVG SGLDLSSLLD QLTTAEQAPL TAIKTQQSSY QTKLSAYGQL QSMLAAFQAS ANQLSNPTFF QSTTASASNT SVLSATGSTT AVPGTYSVNV TQLAQSQSVV STGQASQTTA VGTGTIHIDF GAITGGTLDS NPASATYGKY TGATFTANSG STGVDITIDS SNNTLQGVRD AINKANAGVT ASIVNDGSGT PYRLVISSNA TGATNSVRMS VNETDGGTGL SDLAAYDPAG TQNMQQTIAA QNAQLTVNNI AVQSKGNSVA DAVPGVVLNL TQTGTSSVTV QRDNSSIVSG VQAFVAAYNN LQNTAASLSA YDPSTKTGSP LTGDSTLSII QSQMRSVMNT PQSGNALTTL SQIGISFQND GTLALDTTKL TSALNSNPGA VAGLFGNTDG VSGYGNQINK LVTGLTSSNG ALTTATAGIN NTLKDLSNQY DETQTRVDAV IANYKTQFTQ LDVIMSQMQN TSSYLTQQFS AMNGTSSSKK
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