Gene Rmet_5246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5246 
Symbol 
ID4042107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1945038 
End bp1945592 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content70% 
IMG OID637980664 
Producthypothetical protein 
Protein accessionYP_587374 
Protein GI94314165 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.197347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC CGCTTGCCGC ATCCGCTGGC TCGCTCTGGA TGCCATTGGG CGTCGCGCTT 
CTGGCTGGCG CGATGATCCC GTTCCAGGCC GGCAGCAACG CCACGCTGGG CCGCGCGCTC
GGGCACCCGC TCTGGGCCAC CGTGATCTCG CTCGTGATCA GCCTGGTTGC CGTCGTGCCC
GTGCTGCTGG CACTGCGCGC GCCGCCGCCC AATCTCGCAG CGGCCGCGCA GGGACCGTGG
TGGCAATGGA TCGGGGGGCT GTTCGGCGTG ATCTACATCA CTGCGGCGCT GTGGCTGGCG
CCGCGCATGG GCGCCGCGAA CTTCATCGTC GGCGCCGTGG CCGGCCAGTT GCTGGCCTCG
ATGCTGGTCG ATCATTTCGG TTTGGTCGGC CTGCCGGCCC GGCCAGTCAC GCTGGCGCGC
CTGGCCGGCG TGGTGCTGGT CCTGGCGGGC ATCTGCGTCA TGCAATGGCA GCCGACGCGG
GCCACGGGCA GCGCATTGAG CGAGCGAAAT CTCAGGGGAC AGTCAGATCA GCCAAGGCAT
CCCGGATCAG CGTAA
 
Protein sequence
MTSPLAASAG SLWMPLGVAL LAGAMIPFQA GSNATLGRAL GHPLWATVIS LVISLVAVVP 
VLLALRAPPP NLAAAAQGPW WQWIGGLFGV IYITAALWLA PRMGAANFIV GAVAGQLLAS
MLVDHFGLVG LPARPVTLAR LAGVVLVLAG ICVMQWQPTR ATGSALSERN LRGQSDQPRH
PGSA