| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5229 |
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| Symbol | |
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| ID | 4042090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1925035 |
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| End bp | 1926054 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980647 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_587357 |
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| Protein GI | 94314148 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0958531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.127084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCCC TAGTGCGAAC AAGCGGACTG CGTGGCTACC CGGCGCTGAT GCGCGCCATG
GGTTGCGACC CCGCGCCGCT GCTGCGGCGC TATCACGTCG ACGAAGGGGC GCTCGACAGC
GACGACGCCA TGATTTCCCT GCGTGCTGTC GTGCATCTTC TGGAGGCCAG CGCGGAACAG
ACCCGGACCG GTGACTTCGG CCTGCGCTTG TCCAACCACC AGAGCATTGA CGTGCTGGGG
CCCTTGAGCA TTGCGTTGCA GAATGCAACG ACAATCCGCG CCGGTATGGA TTTCGCGGCG
CACCATATGT TTGTGCATAG TCCGGGTCTC GTCTACACAG TCCACGAGCA CAGCGAGATT
GCGAAGGATG CGGCCGAGGT CTCCATCGAG ATCCGGCTCT CGCGTCAGCC GGCCCAGCGG
CAAGCCATTG ACCTGTGCCT GGCGGATATG CACAACTTCA CCCGGCTACT CGCCGGCGAC
CGATACGCGC TTCGCGCGGT GTCCATTCCT CACACGCCGA TTGCATCGCT TAGCACCTAC
GAGCGCTTCT TTGGCGCCAG GGTATTGGTG GAGCAGCCAA GGGCCAGTCT GCATCTCAGC
CGCAGCACGC TTGCGGCCGA CCTGCTGGGC GTCGACGCCA CGTTGCGGCG GATCGCGGAG
GACTATATCT TCCGCAATTT CCGCAGCGAG CACGGCAGTG TTTCGGATCG TGTGCGGCAG
GTGCTGCGCG ACACGCTGGG CACGTCGAGC CACAGCAAGG CCAGCGTGGC CGATCTGTTG
GCCATGCACC CGCGCACGAT GCAACGCCGC CTTACCGCGG AGGCAACCAG TTTCGAGGCC
ATAAGAAACG ATGTGCGCAA GGAGTTGGCG ATGCGCTATT TGTCCGAAAC CAATCTGCCT
CTCGGGCAGA TCACCCTGCT TCTTGGCCTT CCCGCCCAAT CTGCATTGTC GCGGGCCTGC
CGTCAGTGGT ATGGCGCCGC CCCTTCGGCA CTGCGCAAAC ATAAACGCAC CCCAGATTGA
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| Protein sequence | MDALVRTSGL RGYPALMRAM GCDPAPLLRR YHVDEGALDS DDAMISLRAV VHLLEASAEQ
TRTGDFGLRL SNHQSIDVLG PLSIALQNAT TIRAGMDFAA HHMFVHSPGL VYTVHEHSEI
AKDAAEVSIE IRLSRQPAQR QAIDLCLADM HNFTRLLAGD RYALRAVSIP HTPIASLSTY
ERFFGARVLV EQPRASLHLS RSTLAADLLG VDATLRRIAE DYIFRNFRSE HGSVSDRVRQ
VLRDTLGTSS HSKASVADLL AMHPRTMQRR LTAEATSFEA IRNDVRKELA MRYLSETNLP
LGQITLLLGL PAQSALSRAC RQWYGAAPSA LRKHKRTPD
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