| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5213 |
|---|
| Symbol | |
|---|
| ID | 4042074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1906845 |
|---|
| End bp | 1907510 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637980631 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_587341 |
|---|
| Protein GI | 94314132 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.380021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.310032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCA TCGCTTCCCA AATTGGCCAG CAACTTGCCG ACGAGATCAT CTCGGGCGCG
CTGCCGCCCG GCGCGAAGCT CGAGGAGCCT GCGCTGGCCG AGCGTTTCCA GGTATCGCGC
ACGCCAGTGC GCGAGGCGCT GCGGCTGCTC GATGCACGCG GCCTGATAGA ACTGGTGCCG
CGTCGCGGCG GGGTGGTGAT CAACACCAGC CCCGAGCAAC TCGCCGATAT GCTCGAGGCA
CTGTGCGAAC TGGAGTCGCT GTGCTGCCGC ATTGCCACGC AGCGTATGAG CGCGATGCAG
CGCCGGCAGC TGGAACTCCT GCACGAAGAG GCCATCTCCG CTGCGGAGAA ACACGACAGT
GACGCTTACC TGACCCTGAA CCATCGCTTT CATCAACTGA TCTGCCAAGG CACCCAGAAT
GCGACCCTGG TAGCTGCGGT GGAAAGCCTG CGCGAGCGGC TGGCGCCGTT CCGCGCGGCG
CAGTCGGGCG TCGAGCGCCG CTTCGAGGTT TCGCACCGCG AGCACCAGCA GATCGTGGAG
GCAGTGCTGG GCGGCCATCC CGAGCAGGCC TATCTGGCGA TGCGCAGCCA CACCACGCGG
CTCACCCTGC ATGTGATGGA ACTGATCCAG TCGAAGCAGG GCGGCGGCGC GAAAAGCGCG
GGCTGA
|
|---|
| Protein sequence | MTTIASQIGQ QLADEIISGA LPPGAKLEEP ALAERFQVSR TPVREALRLL DARGLIELVP
RRGGVVINTS PEQLADMLEA LCELESLCCR IATQRMSAMQ RRQLELLHEE AISAAEKHDS
DAYLTLNHRF HQLICQGTQN ATLVAAVESL RERLAPFRAA QSGVERRFEV SHREHQQIVE
AVLGGHPEQA YLAMRSHTTR LTLHVMELIQ SKQGGGAKSA G
|
|---|
| |