| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5171 |
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| Symbol | cspA |
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| ID | 4042032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1868927 |
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| End bp | 1869307 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637980589 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_587299 |
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| Protein GI | 94314090 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.515643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.7858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCATTG ACCGAGGTGC GGTGTACCTG TATAAGTATG ATCGCAGGAT CTTCAAGCGT
AACCTCGAAG CGTTAGGTGT TTACCTCGGC AGCACCACTT TCTCTCCATG TTTCCTCCTT
GATCGTCATG CCTCGTCCGC TATTTCGGCA CGGCGAGAAT TTTTAAGGAA TTTCTACATG
GAAACCGGTA CTGTAAAGTG GTTTAACGAT TCAAAAGGTT TTGGTTTCAT CACGCCGGAT
GCAGGCGGAG ACGACCTGTT TGCCCATTTT TCCGAAGTGC AAGGTAATGG GTTCAAGTCG
CTTCAGGAAG GCCAGAAAGT GCGCTATGTG GCCGGCGTAG GCCAGAAGGG CCCCGCGGCG
ACCAAGATCG AACCGATCTA A
|
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| Protein sequence | MFIDRGAVYL YKYDRRIFKR NLEALGVYLG STTFSPCFLL DRHASSAISA RREFLRNFYM
ETGTVKWFND SKGFGFITPD AGGDDLFAHF SEVQGNGFKS LQEGQKVRYV AGVGQKGPAA
TKIEPI
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