Gene Rmet_5112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5112 
Symbol 
ID4041973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1805782 
End bp1806180 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID637980530 
Producthypothetical protein 
Protein accessionYP_587240 
Protein GI94314031 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value9.23569e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG CACCTCCATC CGGCGACCCG GCAACCACGT CTGCCGACGC CCACTACTTC 
CAGCGCCTCT CCGAAGGCGT GTTCGAAATC CCCCAGTGCC GCGACTGCGG CCGGCATCAC
TTCTTTCCGC GCGTCGTTTG CCCTCATTGC GGCTCCGTAG CGTTGCAGTG GGCCGCGCCG
AGCGGTCTTG GCACCGTGTA CTCGACCACG GTCGTGCGCA AAAAGGACGG GGATTACAAC
GTGTGCCTGG TCGATCTCGA CGAGGGGCCG CGCATGATGA GCTGCGTGAT CGGTGTGGAT
CCCGACGCGG TGAGGATCGG GCACCGCGTC AGGGCGCAGG TGCAGCGCAA GGGCGAGGAC
GCATTGCTGG TGTTCGCGCC GGCCGGGGAG CGACAATGA
 
Protein sequence
MTIAPPSGDP ATTSADAHYF QRLSEGVFEI PQCRDCGRHH FFPRVVCPHC GSVALQWAAP 
SGLGTVYSTT VVRKKDGDYN VCLVDLDEGP RMMSCVIGVD PDAVRIGHRV RAQVQRKGED
ALLVFAPAGE RQ