Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5101 |
Symbol | |
ID | 4041962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1792803 |
End bp | 1793750 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637980519 |
Product | LysR family transcriptional regulator |
Protein accession | YP_587229 |
Protein GI | 94314020 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.428224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.402017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATA TAAGAGGTAT AAGTGTGGTT GATTTCAAGG GCGTGGATCT GAATCTTCTG GTGACCCTGG ATGCCTTGCT GGATGAACGT AACGTCACGC ATACGGCGGA GCGGCTCGGG CTGACGCAGC CCGCCGTATC GGCCCAACTG GCGCGGCTGC GGCGCATCTT CGACGATCCA TTGCTGATCC CGGCCGATAC GGGGCGGGGA ATGATCGCAA GCGCGCGGGC CCTGGCATTG CTGGAGCCGC TGCACGTCGC GCTCAAGGAC CTGGAGTCCG TTGTGCATCG GCGGCCCGAG TTCGATCCGT TCGTCGACAC GCGCCAGTTC GTGATCGCCG CGAGCGATAA CGCCACGTCG ACGCTTGGCA TGTCCTTGTT GGAGCGGCTA TCGATTGTCG CGGGGACCGG GGTGCGCGTG GCGTTCGTGC ATGGACGGCA GGCCGAGATC GCCGCCCAGC TCGAATCGGG TGAAGTCGAT CTGCTGATCG GGTCCGAGCG CATGGTTCCA CCAACCATGC GGGCGCGCAA ACTTCTCGAT GAGACCTTCG TGATGGCGCA GCGGAAATCC CATCCTCGGG GAGCGCGCCG GCTGACGCTC GATATGTACT GCAAATTGCG CCACGTGCTG GTTTCCACGA GTGGTGGCAG CTTCTTCGGC TTCGTTGACG AGCAGCTTCA GTTGCTGGGT CGATCGCGTG ATGTCGCGGT ATCGGTTCAG GCATTCACGG TGGTCCCCGA TTTGCTGCGC CGTAGTGACT ACGTCTGCAC GATGCCGGCT CGGCTGGCGG CACGCTATGC CGATTGGCTG GATGCCTTCG CGCTGCCGTT CGATGTGCCG GGATTCTCGC TCAGCGCGGC ATGGCACCCG CGCAACCACG CGGACCCCGC GATTGCCTGG CTGCGGAGCA CACTGGCCGA GGTGGCCGGC CAGTTGCGTG AGGGCTGA
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Protein sequence | MTDIRGISVV DFKGVDLNLL VTLDALLDER NVTHTAERLG LTQPAVSAQL ARLRRIFDDP LLIPADTGRG MIASARALAL LEPLHVALKD LESVVHRRPE FDPFVDTRQF VIAASDNATS TLGMSLLERL SIVAGTGVRV AFVHGRQAEI AAQLESGEVD LLIGSERMVP PTMRARKLLD ETFVMAQRKS HPRGARRLTL DMYCKLRHVL VSTSGGSFFG FVDEQLQLLG RSRDVAVSVQ AFTVVPDLLR RSDYVCTMPA RLAARYADWL DAFALPFDVP GFSLSAAWHP RNHADPAIAW LRSTLAEVAG QLREG
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