Gene Rmet_5101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5101 
Symbol 
ID4041962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1792803 
End bp1793750 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content64% 
IMG OID637980519 
ProductLysR family transcriptional regulator 
Protein accessionYP_587229 
Protein GI94314020 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.428224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.402017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATA TAAGAGGTAT AAGTGTGGTT GATTTCAAGG GCGTGGATCT GAATCTTCTG 
GTGACCCTGG ATGCCTTGCT GGATGAACGT AACGTCACGC ATACGGCGGA GCGGCTCGGG
CTGACGCAGC CCGCCGTATC GGCCCAACTG GCGCGGCTGC GGCGCATCTT CGACGATCCA
TTGCTGATCC CGGCCGATAC GGGGCGGGGA ATGATCGCAA GCGCGCGGGC CCTGGCATTG
CTGGAGCCGC TGCACGTCGC GCTCAAGGAC CTGGAGTCCG TTGTGCATCG GCGGCCCGAG
TTCGATCCGT TCGTCGACAC GCGCCAGTTC GTGATCGCCG CGAGCGATAA CGCCACGTCG
ACGCTTGGCA TGTCCTTGTT GGAGCGGCTA TCGATTGTCG CGGGGACCGG GGTGCGCGTG
GCGTTCGTGC ATGGACGGCA GGCCGAGATC GCCGCCCAGC TCGAATCGGG TGAAGTCGAT
CTGCTGATCG GGTCCGAGCG CATGGTTCCA CCAACCATGC GGGCGCGCAA ACTTCTCGAT
GAGACCTTCG TGATGGCGCA GCGGAAATCC CATCCTCGGG GAGCGCGCCG GCTGACGCTC
GATATGTACT GCAAATTGCG CCACGTGCTG GTTTCCACGA GTGGTGGCAG CTTCTTCGGC
TTCGTTGACG AGCAGCTTCA GTTGCTGGGT CGATCGCGTG ATGTCGCGGT ATCGGTTCAG
GCATTCACGG TGGTCCCCGA TTTGCTGCGC CGTAGTGACT ACGTCTGCAC GATGCCGGCT
CGGCTGGCGG CACGCTATGC CGATTGGCTG GATGCCTTCG CGCTGCCGTT CGATGTGCCG
GGATTCTCGC TCAGCGCGGC ATGGCACCCG CGCAACCACG CGGACCCCGC GATTGCCTGG
CTGCGGAGCA CACTGGCCGA GGTGGCCGGC CAGTTGCGTG AGGGCTGA
 
Protein sequence
MTDIRGISVV DFKGVDLNLL VTLDALLDER NVTHTAERLG LTQPAVSAQL ARLRRIFDDP 
LLIPADTGRG MIASARALAL LEPLHVALKD LESVVHRRPE FDPFVDTRQF VIAASDNATS
TLGMSLLERL SIVAGTGVRV AFVHGRQAEI AAQLESGEVD LLIGSERMVP PTMRARKLLD
ETFVMAQRKS HPRGARRLTL DMYCKLRHVL VSTSGGSFFG FVDEQLQLLG RSRDVAVSVQ
AFTVVPDLLR RSDYVCTMPA RLAARYADWL DAFALPFDVP GFSLSAAWHP RNHADPAIAW
LRSTLAEVAG QLREG