Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5061 |
Symbol | bugT |
ID | 4041923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1750922 |
End bp | 1751929 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637980482 |
Product | extra-cytoplasmic solute receptor |
Protein accession | YP_587192 |
Protein GI | 94313983 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000369607 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGGA TGACAACCGG AAAGATGAGC CTGACCGCCC GCATCGCGCT ACGCGTGCTG CTAGCCACCG CCGCCATTGC CGCCCTGCCG CTTGGCGCTC ACGCAGCGGA TGCGTGGCCA TCCCGCCCGA TTCAGTTGCT CATTCCCTAC CCGCCCGGCG GCAGCGCCGA CCTGCTTGCC CGCCCGCTCG GCGCCAAGCT TCAGGAGCGG CTGGGCCAGC CCATCGTCCT AGACTATCGT CCCGGCGCGG GCGGCACGAT CGCCACGCAG GCGCTGGCCC GCAGCAAACC CGACGGCTAC ACGCTGATCA TGGTGCTGGC CGCGCACGCG ATCAATCCGA GCCTGTATCC CAAGCTGCCG TACGACACGC GCAAGGACTT CGCACCGGTC TCGCTGGTGG CCAACCTGCC GTTGATCCTG GCCGGCAGCC CGTCGCTCAA GGCGCGCAAC GTGCCCGAAC TGATCGCCGC CGCCAAGGCC GCGCCCGGCA CCATTACCTT CGGCTCCGCC GGCAACGGCA ACACCGGGCA TCTGGCGGGC GAACTGTTCG ATTCGATGGC GGGTGTCAAG ATGACCCACG TGCCATACAA GGGTAGCGCC CAGGTGGTCA ACGCCATGCT TGCCGGCGAT ATTCAGCTTA CGTTCGACAG CATCTCGACC TCGATGCCGC AGATCCGCGC CGGACGCATG ACCGCGCTGG CCGTGACCAG CGCCAAACGC GCGGCGATGG CGCCCGATGT GCCGACGCTG GCCGAGGCTG GCGTGCCCGG CTTCGACATC AATGGCTGGT ATGCCATCCT GGCCCCGGCC GGCACCCCGC GCGCCGTCGT CGACAAACTC AGCAGCGAGA TTGCCGCCGT GCTGACCCAG CCGGAACTCC GCTCGCAACT CGCCGCCAAT GGTTACGAGC CGGTGGGGTC CACGCCGGCC GCCTTGGGCG CGCACATCGA CGCCGAACTG GTGCGATGGA ACAAGGTGGT GCGTGACGCG GGCGTGAAGC TGGAGTAA
|
Protein sequence | MTRMTTGKMS LTARIALRVL LATAAIAALP LGAHAADAWP SRPIQLLIPY PPGGSADLLA RPLGAKLQER LGQPIVLDYR PGAGGTIATQ ALARSKPDGY TLIMVLAAHA INPSLYPKLP YDTRKDFAPV SLVANLPLIL AGSPSLKARN VPELIAAAKA APGTITFGSA GNGNTGHLAG ELFDSMAGVK MTHVPYKGSA QVVNAMLAGD IQLTFDSIST SMPQIRAGRM TALAVTSAKR AAMAPDVPTL AEAGVPGFDI NGWYAILAPA GTPRAVVDKL SSEIAAVLTQ PELRSQLAAN GYEPVGSTPA ALGAHIDAEL VRWNKVVRDA GVKLE
|
| |