Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4977 |
Symbol | mmfS |
ID | 4041839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1653953 |
End bp | 1655284 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637980398 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_587108 |
Protein GI | 94313899 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.870976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.849775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGAAT CAGTTCAGCT CAAGCTGTCC TTCACCTTGT CGCTGGCCAT CCTCGTGGTG GCCGTTGTGG CGGGCGTATT CTCGTTCCTG TCCGCCTTCG ATGAAGCGCA CGAACTACAG GACGATGTAC TGCGCCAGGT GGCGCAGCTC ATGGATCGCC AGCGCTTGTT GCCTGCCGTG CCAACCACCG ATATCCGTCT CAAGGATGTC GATGAAGAGT CGCGCGTGAT CGTCCAGCGC TTGGGTGAGG TCAGTCCCTC TACGGTAGGC GTGGATGCAG GAGGCGTGCT CCCGCTCCCG GCGACCTTGG CGGATGGATT GCACACGCTG GAAGTTGGTG GCGAGACGTT TCGCGTGCTG GTCAAGACCA CGGCGAGCGG CGAACGCATT GCTGTGGCTC AGGAGTCCGG TTTCCGCAAT GAAATTGCCC GCGACGGGGC ACTGCGCACG GTGATGCCTT TCTTGATTCT CGTGCCGGTG CTGCTGTTGA TCGTTGCTGA CCTGGTGCGC AAGATGTTCC AGCCCATCGC GGCGCTGTCC AAGGAAATAG ACCAGCGGGC AGAGCAGGAA CTGCATCCCG TCGAAGACCG CCACCTTCCG GTCGAGGTAC GTCCGTTTGT CGTGGCGATC AATCGCCTGC TCGCTCGTGT CAGCCAGTCG ATGGAATCTC AGCGCCGCTT TGTGGCGGAT GCCGCGCACG AGCTACGTTC GCCGCTGACA GCCATGTCGC TGCAAGCAGA ACGGCTCGCG GAAGCGGAAA TGTCCAGCGT GGCGCGCGAA CGGCTGACGG TTTTGCGCCA AGGGATCGAG CGCGGCCGCA GCCTGCTCGA TCAACTCTTG ACCTTGGCCA AGGCACAGTC GGCCACCGAC CTGCCGAAGT CGCCTGTATC TGTCCAGAGC ATCTACCGCC GCGTGCTGGA AGACCTCATG CCGCTGGCCG AGGCCAAGCA CATCGACATC GGTGTCGAAG GCGCGCTGGA CGCCGAAGTG TGGGCAAGCG AGCTGGACAT GATCGCTGTG GTCAAGAACC TAGTCGATAA CGCCATCCGC TACACGCCAG AGGGAGGGCG TGTTGATCTT TCTGTGGGTG TTTCGGAAGG GAAGGTCGTA CTACGTATTC AGGACAGTGG GCCTGGCATT CCGTTGGCTG AACGGGATCG AGTGTTTGAT CCCTTCTACC GCACGCTGGG GAGCGAGCAG ATCGGCTCGG GTCTGGGACT ATCCATTGTC CAGACGATTG CCAATCGCAT CGGTGCTGAA ATCCGCCTCG ACTTCTCAGA TCAAGAGAAG CAAACTGGCT TAAATGTTGC CGTTATCGCT CCCATGCGGT AG
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Protein sequence | MNESVQLKLS FTLSLAILVV AVVAGVFSFL SAFDEAHELQ DDVLRQVAQL MDRQRLLPAV PTTDIRLKDV DEESRVIVQR LGEVSPSTVG VDAGGVLPLP ATLADGLHTL EVGGETFRVL VKTTASGERI AVAQESGFRN EIARDGALRT VMPFLILVPV LLLIVADLVR KMFQPIAALS KEIDQRAEQE LHPVEDRHLP VEVRPFVVAI NRLLARVSQS MESQRRFVAD AAHELRSPLT AMSLQAERLA EAEMSSVARE RLTVLRQGIE RGRSLLDQLL TLAKAQSATD LPKSPVSVQS IYRRVLEDLM PLAEAKHIDI GVEGALDAEV WASELDMIAV VKNLVDNAIR YTPEGGRVDL SVGVSEGKVV LRIQDSGPGI PLAERDRVFD PFYRTLGSEQ IGSGLGLSIV QTIANRIGAE IRLDFSDQEK QTGLNVAVIA PMR
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