| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4972 |
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| Symbol | tniA |
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| ID | 4041834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1648938 |
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| End bp | 1650626 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980393 |
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| Product | transposase |
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| Protein accession | YP_587103 |
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| Protein GI | 94313894 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0764461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.415785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGG CGACCGATAC CGCACCGATT ACCGAGCACG GCGTGGCCAC CCTGCCAGAA
CAGGCATGGG AGCGTGCGCG TCGTCGCGCG GAGATCATTG GGCCGTTGGC GCAGTCGGAG
ACGGTTGGGC ATGAAGCGGC CGACGCGGCA GCCCAGGCAT TGGGGCTGTC CCGGCGGCAG
GTCTACGTCC TGATCCGCCG TGCCCGGCTA GGATCGGGGC TGGTCACTGA CTTGGCTCTT
GGGCAGTCGA GCGGTGGCAA AGGTAAAGGC CGCTTGCCGG AGTCGGTCGA ACGAATCATC
CGCGAGTTAC TGCAAAAGCG CTTCCTGACC AAGCAGAAGC GTAGCTTGGC GGCGTTCCAC
CGCGAAGTTG TGCGGGCGTG CAAGCTGCAA AAGCTGCGGG TGCCGGCGCG CAACACGGTG
GCTCTGCGGA TCGCCGGCCT CGATCCGCGC GAGGTCACTC ACCGCCGGGA AGGACAAGAT
GCCGCCCGCG ACCTGCAAGG TGTTGGTGGT GTTCCGCCAC CCGTCTCCGC GCCGCTGGAG
CAGGTGCAGA TCGACCACAC AGTCATCGAC CTGATCGTGG TGGACGAGCG CGACCGGCAA
CCGATTGGCC GTCCATACCT GACCCTCGCC ATCGACGTAT TCACCCGCTG CGTGGTTGGC
ATGGTCGTTA CGCTGGAAGC CCCGTCCGCC GTCTCGGTCG GCTTGTGCTT GGTGCATGCC
GCCTGCGACA AGCGCCCTTG GTTGGAAGGG TTGAACGTAG AGATGGATTG GCCGATGAGC
GGCAAGCCCA GACTGCTCTA CTTGGACAAC GCGGCTGAGT TCAAGAGCGA GGCGCTGCGC
CGTGGCTGCG AGCAGCATGG CATCCGGTTG GACTATCGCC CGCTTGGGCA GCCGCACTAC
GGCGGTATCG TGGAACGGAT CATCGGCACG GCGATGCAGA TGATCCACGA CGAATTGCCG
GGGACGACCT TCTCCAATCC TGACCAGCGC GGGGAATACG CCTCCGAGAA GATGGCCGCC
CTGACACTGC GCGAGCTGGA GCGCTGGCTC ACATTGGCGG TCGGCACCTA TCACGGCTCC
GTGCACAACG GCCTGCTCCA ACCGCCGGCC GCGCGCTGGG CCGAAGCTAT CACGCGGACC
GGCGTGCCAA CCGTCATCAC TCGCGCTACG GCTTTTCTGG TCGATTTTCT GCCCATCATC
CGCCGCACGC TGACCCGCAC CGGCTTCGTC ATCGACCACA TCCACTACTA CGCCGATGCG
CTCAAGCCGT GGATAGCTCG GCGGGACCGC TTGCCTGCGT TCCTGATCCG GCGCGACCCG
CGCGACATCA GCCGCATATG GGTGCTGGAA CCAGAGGGGC AGCACTACCT GGAAATTCCC
TACCGTACCT TGTCGCACCC GGCTGTCACC CTCTGGGAAC AACGACAGGC GCTGGCGAAA
TTGCGGCAGC AAGGGCGCGA ACAGGTGGAT GAGTCGGCGT TGTTCCGCAT GATCGGCCAG
ATGCGCGAAA TCGTTACCAC CGCGCAGAAG GCTACGCGCA AGGCGCGGCG CGACGCGGAT
CGACGCCAGC ATCTCAAGGC AACGGCAACG CCTGTCAAAA CCACGCCACC ACCGGGCGCT
GACATGGATG GGCAGCAGGC AGACAACCAG CCGCCGGCCA AACCGTTCGA CCAGATTGAG
GAGTGGTAG
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| Protein sequence | MSMATDTAPI TEHGVATLPE QAWERARRRA EIIGPLAQSE TVGHEAADAA AQALGLSRRQ
VYVLIRRARL GSGLVTDLAL GQSSGGKGKG RLPESVERII RELLQKRFLT KQKRSLAAFH
REVVRACKLQ KLRVPARNTV ALRIAGLDPR EVTHRREGQD AARDLQGVGG VPPPVSAPLE
QVQIDHTVID LIVVDERDRQ PIGRPYLTLA IDVFTRCVVG MVVTLEAPSA VSVGLCLVHA
ACDKRPWLEG LNVEMDWPMS GKPRLLYLDN AAEFKSEALR RGCEQHGIRL DYRPLGQPHY
GGIVERIIGT AMQMIHDELP GTTFSNPDQR GEYASEKMAA LTLRELERWL TLAVGTYHGS
VHNGLLQPPA ARWAEAITRT GVPTVITRAT AFLVDFLPII RRTLTRTGFV IDHIHYYADA
LKPWIARRDR LPAFLIRRDP RDISRIWVLE PEGQHYLEIP YRTLSHPAVT LWEQRQALAK
LRQQGREQVD ESALFRMIGQ MREIVTTAQK ATRKARRDAD RRQHLKATAT PVKTTPPPGA
DMDGQQADNQ PPAKPFDQIE EW
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