Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4942 |
Symbol | gabD |
ID | 4041804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1607058 |
End bp | 1608506 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980363 |
Product | succinate-semialdehyde dehydrogenase I, NADP-dependent |
Protein accession | YP_587073 |
Protein GI | 94313864 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.498743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCA AGGACCCTTC GCTGTTCAAG CAACTGGCCT ATGTCGACGG TCAATGGATC AGCGCCGATT CGGGCGCCAC GTTCGACGTC ACGGACCCGG CCACTGGCGA GGTCATCGCC CGGGTGGCCG ACCTGGGTGC TGCCGAGACC ACGCGCGCCG TTGCTGCCGC GGAAGTCGCC CAGAAAGCCT GGGCGGCAAA GACCGGCAAG GAGCGCGCCA ATATCCTGCG CCGCTGGTTC GACCTGATGT TGGCCAATAC CGACGACCTG GCCTACCTGA TGACGCGCGA GCAAGGCAAG CCGCTGGCCG AGGCCAAGGG CGAGATCGCC TACGCCGCCA GCTTCATCGA GTGGTTCGCC GAGGAAGCCA AGCGCGTGGA CGGTGAAGTG CTGGCCACGC CTGCCGCCGA CAAGCGGCTG GTCACGCTGC GCCAGCCGGT AGGTGTGTGC GCCGCGATCA CCCCGTGGAA CTTCCCGGCC GCGATGATTA CGCGCAAGGT GGCGCCGGCG CTGGCCGCTG GCTGCGCGAT CGTGATCAAG CCGGCCGAAC TGACGCCGCT GTCCGCATTC GCGCTGGCCG AACTCGCGCA TCGCGCCGGC GTGCCGGCAG GCGTGCTGCA AGTTGTCACC GGTGACGCCC GGAACATTGG TGGCGTGCTG ACGGCCAGCC CGATCGTGCG CAAGCTGTCG TTCACGGGCT CGACGGAAGT GGGCCGCATC CTGATGGCTC AGTCGGCGCC GACCATCAAG CGCCTGTCGC TCGAACTCGG TGGCAATGCG CCGTTCATCG TCTTTGACGA TGCCGACGTC GATGCGGCCG TGGAAGGCGC GATCGTCGCC AAGTACCGCA ACGGCGGCCA GACCTGCGTG TGCGCGAACC GCTTCTACAT CCAGGACGGC ATTTACGATG CGTTCGCCGC TAAGTTTGCC GAGCGCACCG CTCAGCTGCG TGTCGGCAAC GGGCTCGAGG CAGGCGTGGT GATCGGCCCG CTGATCGAGG ACGCCGCGAT CGAGAAGGTG AATTCGCTGG TCGAGGATGC CACGTCAAAG GGCGGCAAGG TACTGGCCGG TGGCGGCAAG CACCCGCTCG GCGGAACGTA TTACACGCCG ACCGTGATCG GCAATGCCAC CGCCGACATG CGCATGGCGC GCGAAGAAAT CTTCGGGCCG GTGGCACCGC TGTTCCGCTT CAAGCAGGAC GACGAAGCCG TTGCCGCCGC CAACGCCACC GAGTATGGCC TGGCCGCCTA TCTCTACACC CGCGACATCT CGCGCGCATG GCGCACCGCC GAGGCGCTGG AGTACGGCAT GGTCGGCCTG AACACGGGCC TGATCTCCAA CGAGGTGGCA CCGTTCGGCG GCATCAAGCA ATCCGGCGTC GGCCGCGAAG GCTCGCGCCA CGGCATCGAG GAATACCTCG AGATCAAGTA TCTTTGCCTG CAGATGTGA
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Protein sequence | MQLKDPSLFK QLAYVDGQWI SADSGATFDV TDPATGEVIA RVADLGAAET TRAVAAAEVA QKAWAAKTGK ERANILRRWF DLMLANTDDL AYLMTREQGK PLAEAKGEIA YAASFIEWFA EEAKRVDGEV LATPAADKRL VTLRQPVGVC AAITPWNFPA AMITRKVAPA LAAGCAIVIK PAELTPLSAF ALAELAHRAG VPAGVLQVVT GDARNIGGVL TASPIVRKLS FTGSTEVGRI LMAQSAPTIK RLSLELGGNA PFIVFDDADV DAAVEGAIVA KYRNGGQTCV CANRFYIQDG IYDAFAAKFA ERTAQLRVGN GLEAGVVIGP LIEDAAIEKV NSLVEDATSK GGKVLAGGGK HPLGGTYYTP TVIGNATADM RMAREEIFGP VAPLFRFKQD DEAVAAANAT EYGLAAYLYT RDISRAWRTA EALEYGMVGL NTGLISNEVA PFGGIKQSGV GREGSRHGIE EYLEIKYLCL QM
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