Gene Rmet_4933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4933 
Symbol 
ID4041795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1597665 
End bp1598627 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID637980354 
Productputative response regulator receiver (CheY-like) involved in chemotaxis 
Protein accessionYP_587064 
Protein GI94313855 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.173403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.920687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG CGATGAGAGA CATCGACGAG CGCACCAACC TGACCAACAA CAACCAGTTT 
GAGTTGCTGT TGTTCCGACT GGGTGATGCG GCACACACCG GGCAGTCCGA ACTGTTCGGC
ATCAATGTGT TCAAGGTCCG TGAAATTCTG GTGATGCCGC CGGTGACCAG CGTGGTCGGC
GCGGAACCGT CGATCCTGGG CATGGCCGAT ATCCGTGGGC AGGTGATTCC GGTCATCGAC
CTGCCGCGCC TGCTGGAATG CAATCCGAAG TCGGGCCTGA ACATCATGCT CGTGACCGAA
TACGCGCGGT CCACGCAGGG CTTCGCGGTG GAAGCGGTCG AGGAAATCGT CCGCCTGGAC
TGGAACCAGG TGATCTCCGC CGAGACCAGC GTGAAGGGTG GGCTGGTGAC CAGCATCGCC
AAGCTCGATG CGGGTGGCGA GAATCCGCGG CTGGTGCAGG TGCTGGATGT CGAGCAGATC
CTGCGCGACG TGTTGCCTTC GCGCCAGCCG GACGTGGATC CGTCGACCGT CGGCCCAGCG
TTGTCGATCC GCCCCGGCAG CAAGATTCTC TGCGCGGACG ACTCCGCGCT GGCGCGTGGT
CTGATCGAAA ACGGCCTCAA GGCAATGGGC GTGCAAGTCG TGATGACCAA GTCCGGTCAG
GAAGCCTGGG ACATGCTCGG CGAGATCGCC GACCTGACCG CCAGCAAGGG CGCCACGGTC
CGCGACGAGA TCGCGCTGGT GCTGACCGAT CTGGAAATGC CGGAGATGGA TGGCTTCACC
CTGACGCGCA AGATCAAGGC CGACGCCCGG CTGAAGTCGC TGCCGGTGGT GATCCACTCA
TCGCTCTCGG GCGAGGCCAG CGAGGAGCAC GTGCGCAAGG TTGGCGCCGA TGCGTACGTG
TCGAAGTTCC TGGCGAAAGA TTTGGCCGAT ACGATTCGGG GTGTACTCGC ACGGCATCCG
TGA
 
Protein sequence
MTSAMRDIDE RTNLTNNNQF ELLLFRLGDA AHTGQSELFG INVFKVREIL VMPPVTSVVG 
AEPSILGMAD IRGQVIPVID LPRLLECNPK SGLNIMLVTE YARSTQGFAV EAVEEIVRLD
WNQVISAETS VKGGLVTSIA KLDAGGENPR LVQVLDVEQI LRDVLPSRQP DVDPSTVGPA
LSIRPGSKIL CADDSALARG LIENGLKAMG VQVVMTKSGQ EAWDMLGEIA DLTASKGATV
RDEIALVLTD LEMPEMDGFT LTRKIKADAR LKSLPVVIHS SLSGEASEEH VRKVGADAYV
SKFLAKDLAD TIRGVLARHP