| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4925 |
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| Symbol | |
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| ID | 4041787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1586912 |
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| End bp | 1587985 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637980346 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein |
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| Protein accession | YP_587056 |
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| Protein GI | 94313847 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.757451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0949883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC TCTTTGAAAA CCCGATGAAG CTGATGGGCT TCGAGTTCGT TGAATTCGCC
TCGCCCACGC CCAACGTCCT TGAACCGCTG TTCGAGAAAA TGGGCTTCAC CCTGGTGGCC
CGTCACCGCT CGAAGGACGT CGTGCTGTAC CGCCAGGGCG ACATCAATTT CATCGTCAAC
AACGAGCCGC ATAGCCCCGC CGCCTATTTC GCCGCCGAAC ACGGCCCGAG CGCCTGTGGC
ATGGCATTCC GCGTCAAGGA TTCCCACCAG GCCTACAACC GCGCGCTGAT GCTGGGCGCC
CAGCCGGTGG AAATCGCTAC CGGCCCGATG GAACTGCGCC TGCCCGCGAT CAAGGGCATC
GGCGGCGCGC CGCTCTACCT GATCGACCGT TTCGAAGACG GCAAGTCGAT CTATGACATC
GACTTCGAAT TCATCGAGGG CGTGGACCGC CACCCGAAGG GCCACGGCCT GAAGCTGATC
GACCACCTGA CGCACAACGT CTACCGTGGC CGCATGGCGT ACTGGGCGAG CTTCTACGAG
CGCCTGTTCA ACTTCCGCGA AATCCGTTAC TTCGACATCC AGGGCGAATA CACGGGCCTG
ACCTCGAAGG CGATGACCGC GCCGGACGGC AAGATCCGCA TCCCGCTGAA TGAAGAGTCG
TCGAAGGGCG CCGGCCAGAT CGAGGAATTC CTGATGGCGT TCAATGGCGA AGGCATCCAG
CACATCGCCT TCTCCGTCGA CAACCTGATC GAAGTCATCG ACAGCCTGCA GATGGCCGGC
GTCGAACTGA TGACGGCACC GAACGACTAT TACTACCAGG CCCTGGACAC TCGTCTGCCG
GGCCATGGCC AGCCGGTGGA CCAGCTCAAG GCCCGCGGCA TCCTGCTGGA CGGCACGACA
GAAGGCGGCA AGCCGCGCCT GCTGCTGCAG ATCTTCTCGA AGACTGTGCT CGGCCCGGTG
TTCTTCGAAT ACATCCAGCG CTCCGGCGAC GATGGCTTCG GCGAAGGCAA CTTCAAGGCG
CTCTTCGAAT CGCTCGAACG CGACCAGATC GAACGCGGCA CGCTGAAGGT CTGA
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| Protein sequence | MADLFENPMK LMGFEFVEFA SPTPNVLEPL FEKMGFTLVA RHRSKDVVLY RQGDINFIVN
NEPHSPAAYF AAEHGPSACG MAFRVKDSHQ AYNRALMLGA QPVEIATGPM ELRLPAIKGI
GGAPLYLIDR FEDGKSIYDI DFEFIEGVDR HPKGHGLKLI DHLTHNVYRG RMAYWASFYE
RLFNFREIRY FDIQGEYTGL TSKAMTAPDG KIRIPLNEES SKGAGQIEEF LMAFNGEGIQ
HIAFSVDNLI EVIDSLQMAG VELMTAPNDY YYQALDTRLP GHGQPVDQLK ARGILLDGTT
EGGKPRLLLQ IFSKTVLGPV FFEYIQRSGD DGFGEGNFKA LFESLERDQI ERGTLKV
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