Gene Rmet_4919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4919 
SymbolnosX 
ID4041781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1582577 
End bp1583599 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID637980340 
Productmembrane-associated ApbE-like lipoprotein 
Protein accessionYP_587050 
Protein GI94313841 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0104223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGC TCTCTCCTTC CGGCCTTGCC CGGCGGCGCT ACCTGACGGC GGCACCGCTG 
CTTGCCCTCG GCATGTTCGT CCTGCCGGCA TTGGCCGATT CATCGGTCCG GCACGCCTCA
CGCCGGCTGC TCGGCACGCG GGTGGACATC GTGACCGACG GCGTGCCAGC GGATGCGGCC
GCGCAGGCCA TCGACGCGGC GTTCGCCGAG ATGGGCAGGC TCGAACGGAT CATGAGCCGC
TATCGTCCGG ACAGTCAGGT CAGTGCCCTG GCACGTGCTG CCGGCAAGCA CCCGGTACCC
ATCGCGCCCG AGTTGATGTC GGCGCTCAGG TTGGCTAGCG AGGTCTCCGC GCGCAGCCAG
GGCGCCTTCG ACATTACGGT CGGCGCGTTT GAAGGCTGGA ACTTCGATCC GGGCCATGAG
CAAGTGCCCG GGCAAGCCGA ACTGACGCAA GAGCGACCAC TAGTGAACTA CCGTGATGTC
GTTCTGGACT CAACGCGCGG TAGCGCCTAT CTACGGCGTC CCGGCATGAA GCTGGATCTG
GGCGGCATCG CCAAGCTCCC GATCCTGCAA GCCGGCATGG ACGTGCTGCG GCAGCAAGGC
ATCTCGAATG CGATGCTCAA TGGCGGAGGC GACGTGCTGG TCAGCGGCAG GCTTCAGGGC
CGCGACTGGC GTATCGGCCT GCGCGACCCG CTTGCGCCGG AGCGATTGCT GGGAGTAGTG
GCGATCACCG ATGGCGTCGT GGCGTCGTCG GGCGACTATG AGCGCTGCTT TGCCCGTGAT
GGCCAGCGCT ATCACCACAT CCTTGACCCT CGAACCGGCC TGCCAACCCG GGGGCCGCAC
GGGGTCACGC TGGTCGCGCG CAAAACAAGT GACGTCAACG GCCTCGGGGC CGCTATCATG
GTGGCTGGTA CAGCGGCAGG ACGGAGCCTG CTGGGGCCCA TGGCTAACGT GGATGCTCTG
ATTGTCGGGC CCGGGTCTCA TCCATGGATG TCCGAAGGCA TGGCGACCCG TATGCGGTCG
TGA
 
Protein sequence
MHALSPSGLA RRRYLTAAPL LALGMFVLPA LADSSVRHAS RRLLGTRVDI VTDGVPADAA 
AQAIDAAFAE MGRLERIMSR YRPDSQVSAL ARAAGKHPVP IAPELMSALR LASEVSARSQ
GAFDITVGAF EGWNFDPGHE QVPGQAELTQ ERPLVNYRDV VLDSTRGSAY LRRPGMKLDL
GGIAKLPILQ AGMDVLRQQG ISNAMLNGGG DVLVSGRLQG RDWRIGLRDP LAPERLLGVV
AITDGVVASS GDYERCFARD GQRYHHILDP RTGLPTRGPH GVTLVARKTS DVNGLGAAIM
VAGTAAGRSL LGPMANVDAL IVGPGSHPWM SEGMATRMRS