Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4887 |
Symbol | |
ID | 4041749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1549194 |
End bp | 1549769 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637980308 |
Product | putative TetR family transcriptional regulator |
Protein accession | YP_587018 |
Protein GI | 94313809 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0109337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0985913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACCC CATCCGCGCG CGACCGCATC CTCGATACCG CAGCACGCCT GTTCTACCGC GATGGCTATC GCGGTACTGG GATCGACCGG ATCATCGCCG AGTCGGGCGT GGCCAAGATG TCGCTTTACA GGCATTTCCC TTCCAAGAAC GACCTGATCG TCGCGTATCT CGAGAGCCGG CATGACTACT GGATGGGCTG GTTCCGCGAT GCGGTGACCC GACGACTGGC CGCACGCGGC AACCTGGATA TCATGGCCGA TGCGCTAGGC GAGTGGTTCG CTACCGAGGA TTTTCGTGGC TGCTCCTTCA TCAACATGAT CGCGGAGGCG GGCGGCGGTG CCGGTGACGA CCCACGGCTG CTGGCGCAGG CAGTGGCGCA CAAGGCGTCG CTGGAGGACT TCGTCACCGG GATCGCCCAC GATCTTGGGC TGTCCAGCCC ACGTGAAGTG GCGGAAGAGG CCATGCTCTG CATCGAGGGC ATGATCATCC GCTACCAGAC CACGCATGCC AGCAGCGTGA TCGATGCTGG GCGACGGACG CTTGGCAGGC TGCATGCAGC ACATTCGGCA GCGTAA
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Protein sequence | MPTPSARDRI LDTAARLFYR DGYRGTGIDR IIAESGVAKM SLYRHFPSKN DLIVAYLESR HDYWMGWFRD AVTRRLAARG NLDIMADALG EWFATEDFRG CSFINMIAEA GGGAGDDPRL LAQAVAHKAS LEDFVTGIAH DLGLSSPREV AEEAMLCIEG MIIRYQTTHA SSVIDAGRRT LGRLHAAHSA A
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