Gene Rmet_4887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4887 
Symbol 
ID4041749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1549194 
End bp1549769 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content63% 
IMG OID637980308 
Productputative TetR family transcriptional regulator 
Protein accessionYP_587018 
Protein GI94313809 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0109337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0985913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCC CATCCGCGCG CGACCGCATC CTCGATACCG CAGCACGCCT GTTCTACCGC 
GATGGCTATC GCGGTACTGG GATCGACCGG ATCATCGCCG AGTCGGGCGT GGCCAAGATG
TCGCTTTACA GGCATTTCCC TTCCAAGAAC GACCTGATCG TCGCGTATCT CGAGAGCCGG
CATGACTACT GGATGGGCTG GTTCCGCGAT GCGGTGACCC GACGACTGGC CGCACGCGGC
AACCTGGATA TCATGGCCGA TGCGCTAGGC GAGTGGTTCG CTACCGAGGA TTTTCGTGGC
TGCTCCTTCA TCAACATGAT CGCGGAGGCG GGCGGCGGTG CCGGTGACGA CCCACGGCTG
CTGGCGCAGG CAGTGGCGCA CAAGGCGTCG CTGGAGGACT TCGTCACCGG GATCGCCCAC
GATCTTGGGC TGTCCAGCCC ACGTGAAGTG GCGGAAGAGG CCATGCTCTG CATCGAGGGC
ATGATCATCC GCTACCAGAC CACGCATGCC AGCAGCGTGA TCGATGCTGG GCGACGGACG
CTTGGCAGGC TGCATGCAGC ACATTCGGCA GCGTAA
 
Protein sequence
MPTPSARDRI LDTAARLFYR DGYRGTGIDR IIAESGVAKM SLYRHFPSKN DLIVAYLESR 
HDYWMGWFRD AVTRRLAARG NLDIMADALG EWFATEDFRG CSFINMIAEA GGGAGDDPRL
LAQAVAHKAS LEDFVTGIAH DLGLSSPREV AEEAMLCIEG MIIRYQTTHA SSVIDAGRRT
LGRLHAAHSA A