Gene Rmet_4820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4820 
SymbolnasB 
ID4041682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1468759 
End bp1470000 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content67% 
IMG OID637980241 
Productassimilatory nitrate reductase (NADH) small subunit 
Protein accessionYP_586951 
Protein GI94313742 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0713443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.685908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC CCGTCTCGTC CCACGCCAAG CCGCGACTGG TCGTCGTCGG CAATGGCATG 
GCCGGAATGC GCACGGTCGA GGAACTGCTG AAGCTGGCGC CGGACCTGTA TGACATCACA
GTGTTCGGCG CCGAGCCGCA CGGCAACTAC AACCGCATTC TGCTGTCCCC GGTGCTCGCC
GGCGAAAAGA CCGTCGACGA CATCATGCTG AACACCCGAG CCTGGTATGG CCAGCATGGC
ATCGAGTTGC TGGCCGGCGA TCCGGTCGTT GCAATCGACC GGCCGCGCCG GCTGGTGCGT
TCCGCGTCCG GCAAGGAAGT CCGCTATGAC CGCCTGCTGC TGGCCACCGG CTCCAAGCCG
TTCATCATCC CCGTCCCCGG CCACACGCTC GACGGCGTGA TCGCGTTCCG CGATATCCAG
GACGTGGAAA CAATGCTCCA CGCCGCTCGC AATCATCGCC ATGCGGTGGT GATCGGCGGC
GGCCTGCTTG GCCTCGAAGC GGCCAACGGG CTGATGCGTC AGGGCATGGA CGTCACCGTG
GTGCACCTGG CCGATAGCCT GATGGAGCGC CAGCTCGACA AACCTGCCGC CGAACTGCTC
AAGGCAGCGC TGGAACGCAA GGGTCTGCGG TTCCTGCTCA GCGCGCAGAC CGCCGCCGTG
CTCGGCAGCG AGCGGGTCAC GGGCGTGCTG TTCAAAGACG GCACCCAGAT CCCGGCGGAC
CTTGTGGTGA TGACCGCCGG GGTGCGCCCG AACATCGAAC TGGCCGCCAG CGCGGGGCTG
CGCTGCGAGC GCGCGATCGT CGTTGACGAC ACGCTGCAGA CCTTCGACCC GCGCATCTAC
GCCGTGGGCG AATGCGTGCA GCACCGCCAG GCCACGTTCG GGCTGGTGGC GCCGATCTGG
GATCAGGCAC GGGTGTGCGC CGCCCACCTG GCAGGTGCCG GCCACCGCCG CTATGTCCAG
CAAGCCACGG CTACCAAGCT CAAGGTCACG GGCGTGGACC TGTATTCGGC CGGCGACTTC
ATCGGCGGCG ACAACAGCGA AGACCTCGTG CTGCGCGATC CGCGCCGAGG CGTCTACAAA
CGTCTGGTGC TGCAAGGTGG CCGGCTCGTC GGTGCCGTGC TCTATGGCGA CGTCCAGGAC
GGCCCGTGGT ACTTCGACCT GATCCAGACC GGCCAGCCGG TGGCCGCATT GCGTCAGCGC
CTGCTGTTCG GCAAGGCGCA ATGCGAAGCC CTTGCGGCGT AG
 
Protein sequence
MTPPVSSHAK PRLVVVGNGM AGMRTVEELL KLAPDLYDIT VFGAEPHGNY NRILLSPVLA 
GEKTVDDIML NTRAWYGQHG IELLAGDPVV AIDRPRRLVR SASGKEVRYD RLLLATGSKP
FIIPVPGHTL DGVIAFRDIQ DVETMLHAAR NHRHAVVIGG GLLGLEAANG LMRQGMDVTV
VHLADSLMER QLDKPAAELL KAALERKGLR FLLSAQTAAV LGSERVTGVL FKDGTQIPAD
LVVMTAGVRP NIELAASAGL RCERAIVVDD TLQTFDPRIY AVGECVQHRQ ATFGLVAPIW
DQARVCAAHL AGAGHRRYVQ QATATKLKVT GVDLYSAGDF IGGDNSEDLV LRDPRRGVYK
RLVLQGGRLV GAVLYGDVQD GPWYFDLIQT GQPVAALRQR LLFGKAQCEA LAA