Gene Rmet_4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4782 
Symbol 
ID4041644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1425900 
End bp1426823 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID637980203 
Productputative aldo/keto reductase 
Protein accessionYP_586913 
Protein GI94313704 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0411643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.476662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTG ACCGCCGCAC CTTTCTGGGA ATCTCCGCCT CGCTGGCCGC GCTGCCAGCC 
GGCCTCACGC TCGGCAACAC GGCCAGCGCC GCAACCGTCG ACGCGCCGAT GCGTCGCAAG
ATTCCGGGCT CGACCGTGCA ATTGCCCGTC ATTGGCATGG GGACGGCCCG TACGTTCAAC
ACCGGCAAGA GCACCGAAGA ACGCGCACCC CTGACCGAAG TCATGGCCGT GCTGCTGCAA
CGCCTGCCAA GCGCCGTCGT CGATACCGCG CCGAGCTATG GCAGCGCCGA AGCGGTGACC
GGCGACCTGC TGCAAGCCGC CGACGCGCGG CGCCGCGTCT TCCTGGCCAC CAAGATCTCA
GCCAACGCAG CCAGTGCACC AGCGCAGTTC GCCAGTTCGC TATCTGATCT GCATACGGAT
GCGGTCGATT TGCTGCAGGT GCACAACCTG ATCGACTGGC GCGACAACCT GAAGCTGCTT
CGGCAATGGA AGGAACAGCG CAAGACGCGG TATATCGGCA TCACCCACTA TCGGGAAGAC
GCGCAGGATG CCGTCGCGCA GATCGTGCGG GCCGAGAGGC TCGACTTCGT CCAGATCAAC
TATTCACTGG GCGAACGCGG TGCCGAGCGC GTGTTGCTGC CGCTATGCCA GGAGCGCGGC
GTAGCCGTGT TGATCAACCG CCCGTTCCAG GACGGGCGCC TGTTTGCGGC CGTCAAGGGC
AAGCCCGTGC CAGACTGGGC CGCCGAGGTC GACTGCGAGT CCTGGGGTCA GCTCTTCCTG
AAGTTCATCG TCAGTCATCC CGCTGTCACC GCCGCCATCC CGGCCACCTC CAATCCGCAC
AATATGCTCG ACAACGCAGG CGCCGCGTTC GGGCGGATGC CCGATACGCC CGAACGCGCC
CGCATCGCAG CGGCGCTGGC CTGA
 
Protein sequence
MSIDRRTFLG ISASLAALPA GLTLGNTASA ATVDAPMRRK IPGSTVQLPV IGMGTARTFN 
TGKSTEERAP LTEVMAVLLQ RLPSAVVDTA PSYGSAEAVT GDLLQAADAR RRVFLATKIS
ANAASAPAQF ASSLSDLHTD AVDLLQVHNL IDWRDNLKLL RQWKEQRKTR YIGITHYRED
AQDAVAQIVR AERLDFVQIN YSLGERGAER VLLPLCQERG VAVLINRPFQ DGRLFAAVKG
KPVPDWAAEV DCESWGQLFL KFIVSHPAVT AAIPATSNPH NMLDNAGAAF GRMPDTPERA
RIAAALA