| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4736 |
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| Symbol | kdgD |
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| ID | 4041597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1380586 |
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| End bp | 1381500 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980157 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_586867 |
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| Protein GI | 94313658 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.473225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACAC CGCAAGAACT CAAGCAGATC ATCTCGGAAG GCCTGCTCTC TTTCCCTATC
ACCGATTTCG ACGCGCAAGG CAACTTCCGC CCCGATACCT ATATCGAGCG CCTGGAATGG
CTGGCGCCCT ACGGTGCGTC GGCGCTGTTT GCCGCCGGCG GCACGGGTGA GTTCTTCTCG
CTGACGCAGC AGGACTATTC GAACGTGATT CGCACCGCGG TGGAGACCTG CCGGGGCAAG
GTACCCATTC TTGCCGGCGC CGGTGGCGCG ACTCGCGTGG CGATCGAATA CGCGAAGGAA
GCCGAGCGCC TGGGCGCCCA CGGCGTGCTG CTGATGCCGC ACTACCTGAC CGAAGCCAGC
GAAGAAGGCA TCGCCAACCA CATCGAAGAG GTTTGCAAGG CGCTGAAAAT CGGCGTGATC
GTCTACAACC GCGCGAACTC CCGTATCGGC GCCGACCTGC TGGAACGCGT GGTCGACCGC
TGCCCCAACC TGATCGGCTT CAAGGACGGC GTGGGCGAGA TCGAGGCGAT GGTGCGCGTT
CGCCGCAAGC TTGGTGACCG GCTCGCATAC CTGGGCGGCC TGCCTACCGC CGAAGTCTAT
GCCGCCGCCT ACAAGGCGCT GGGCGTGCCC GTCTACTCGT CGGCCGTGTT CAACTTCATC
CCGAAGACCG CGATGGAGTT TTACCGCGCG ATTGCCGCTG ACGACCACGC CACGGTGGGT
CGCCTGATCG ACGATTTCTT CCTGCCGTAC CTGGACATCC GCAACCGCAA ACAAGGCTAC
GCGGTGTCGA TCGTCAAGGC TGGCGCCAAG CTGGTTGGCC ACGATGCCGG TCCGGTGCGC
GCGCCGCTGA CCGATCTGAC CGAAGACGAA ATGGCACGGC TGGATGCGCT GATCCGCAAG
CTCGGACCGC AGTAA
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| Protein sequence | MTTPQELKQI ISEGLLSFPI TDFDAQGNFR PDTYIERLEW LAPYGASALF AAGGTGEFFS
LTQQDYSNVI RTAVETCRGK VPILAGAGGA TRVAIEYAKE AERLGAHGVL LMPHYLTEAS
EEGIANHIEE VCKALKIGVI VYNRANSRIG ADLLERVVDR CPNLIGFKDG VGEIEAMVRV
RRKLGDRLAY LGGLPTAEVY AAAYKALGVP VYSSAVFNFI PKTAMEFYRA IAADDHATVG
RLIDDFFLPY LDIRNRKQGY AVSIVKAGAK LVGHDAGPVR APLTDLTEDE MARLDALIRK
LGPQ
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