| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4693 |
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| Symbol | |
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| ID | 4041554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1329072 |
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| End bp | 1329719 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980114 |
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| Product | putative lytic transglycosylase, catalytic |
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| Protein accession | YP_586824 |
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| Protein GI | 94313615 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000077507 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.120796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACTGGG AGGGGACGCC AATGACTGAG CGCAAGCCAT CAACGTTGCC GAGGACCATC
CTTTTCACGG TCGTGGTGAT CGTGGGGCTT GCCTTTGCGC GCGTGGCACG GGCCCAGATC
TTCGGCGCGG TCAGTGCGGA CGGGTCCATC ACGCTGACCA ATACGGCGGG AAATCCACAT
CTGCACCTGC TGGTCGCCGG CAATCCACCG GCCGAGCGCA AGCCCCGGGA GCCGAGGGAT
CTGCCCACCG ACGCCGCGCT GTTCGCGACT TTCATTTCGG AAGCCAGCCG CAACTCCCAC
CTGCCGCCGG AACTGATCCG TGCCGTGATT GCCATCGAAT CGCGCTTCAA TCCCAATGCG
GTATCCAGAA AGGGCGCGAT CGGACTGATG CAACTGATGC CGGATACCGC CAAGCGGTTC
TCGACCGGCG ACATGCTGAA TCCGCGCGAC AACATACTCG CGGGCGCACA GTACCTGCGC
TATCTGCTGG ACCTGTTCCG CGATGATCTG GAACTTGCGC TGGCGGCCTA CAACGCTGGC
GAGAATGCGG TGATCCAGGC GGGAAACCGG ATCCCGGCCT ACGCGGAAAC GCAGGCCTAC
GTACCGATGG TCATGGCGCA CTACCGCAGG CTGCTGGCCT CGGGGTAA
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| Protein sequence | MYWEGTPMTE RKPSTLPRTI LFTVVVIVGL AFARVARAQI FGAVSADGSI TLTNTAGNPH
LHLLVAGNPP AERKPREPRD LPTDAALFAT FISEASRNSH LPPELIRAVI AIESRFNPNA
VSRKGAIGLM QLMPDTAKRF STGDMLNPRD NILAGAQYLR YLLDLFRDDL ELALAAYNAG
ENAVIQAGNR IPAYAETQAY VPMVMAHYRR LLASG
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