Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4649 |
Symbol | |
ID | 4041510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1279530 |
End bp | 1281017 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980070 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_586780 |
Protein GI | 94313571 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.728729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGA AAGCACTTCC CGGCACCCAT GCCCAAGGAC TGGTTAAACG TACCGCGCGC GCCGTGGCCC TGGCCGCCGC CACACTCGCT GCACTGGGCA TGGCCGCCTG CGCGGTCGGC CCTGACTACC GCACGCCGGA TAGCGAGATG CCGACGCAGT ACCAGCACGC CGCCGACGTG GCAGCGATCA ACGACGCGCG CGAACCGGTG GCGCTGGATA CGTGGTGGGC CGGCTTCCAG GACCCGGTGC TGACAAAGAT CGTCGAGCGG GCCCTTGAAC AGAATCTCGA CATGGCGGCG TCAATTGCCC GCGTGGCGCA GGCCCGTGCC GCCGCCAACT TCGCTGGGGC CGAGTTGCTT CCGCAAGGCA ATGCCTATAG CGACGTGACC AAGCTGCATC AATCCGTACA AAGCCCGCTG GGCAAGATCG GCAGCACATT CCCCGGATAT GACCGCAACC AGACGCTCTA TTCGGTGGGC GCTGCGGCCA CGTGGGAAAT CGACATCGCT GGCGGGCTGC GGCGCGGTGC CGAGGCGGCC AATGCCGAAC TGCAGGCGGC AGAGGCGAAC CACATGGGCG TTCGGATTCT CGTGGCAGCG GAGGCGGCGG ACGCCTACTT CCGTGTGCGG GGGGCTCAGG CTCGCATCGC CATCGCGCAG CAACAGGTCG AGACCAACCA GCGCCTGCTT GATCTCGTGC GTTTGCGGTT GGCCGATGGC ATCGGGGCGG AGCGCGAGCA GGCGCAGGCC GAGGCCCAAC TCTCGCAGAC GCGCGTCACG ATTCCGCCGC TGCAGATCGA ACTGGAAACG CAGCTTAATC GCCTCGACGT CCTGATGGGC GCGCAACCGG GCACCTACGC AGCCGAGTTG CGCGATTCGA AGCACGAAAC GCAGGCGGTG CCACAAGTCG CCTTGGCACA GGGTCCGGCA AACCTGCTGG AACGTCGCCC AGACGTCATT GCCGCCGAAC GCAGGCTTGC GGCGTCGAGT GCGCGCATTG GCGTGGCCAC GGCGGAGTAC TACCCGAAGG TTTCGCTATC GGCATTGCTT GGATTCGAAA GCCTGTCCGC CGGCAAGCTG TTCACCGCGC AGGCCTTCCA GCCTGCGGCG GCGGCTGGGC TGCGCTGGCG GCTGTTCGAT TTCGGCCGGG TCAATGCGGA AGTCGCGCAG GCCAAGGGCG CCAATGCCGA AGCGTTGGCC AGCTATCGCA AGTCGATGCT GCAGGCCACC GAGGACGTCG AAAACGCATT GATCTCGCTG GCGCAGCTCG AATCGCAAAA CCGCGAACTG GCCGTAGAGA TCCGTGCGCA TGAGCGCGCG CGAAACGCAT CCGAGGATGC CTACAAGGGC GGGGTGGTCA GCCTCTATGA AGTGCTGGAC GAAGACCGGC AATTGCTGGC TGCACGCGAC CAGCAGGCAA GGGTGCAGGC GGATAATGCA CGGGCGGCGG TGTCGGCGTT CCGGGCGCTG GGAGGTGGAT GGTCCTGA
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Protein sequence | MASKALPGTH AQGLVKRTAR AVALAAATLA ALGMAACAVG PDYRTPDSEM PTQYQHAADV AAINDAREPV ALDTWWAGFQ DPVLTKIVER ALEQNLDMAA SIARVAQARA AANFAGAELL PQGNAYSDVT KLHQSVQSPL GKIGSTFPGY DRNQTLYSVG AAATWEIDIA GGLRRGAEAA NAELQAAEAN HMGVRILVAA EAADAYFRVR GAQARIAIAQ QQVETNQRLL DLVRLRLADG IGAEREQAQA EAQLSQTRVT IPPLQIELET QLNRLDVLMG AQPGTYAAEL RDSKHETQAV PQVALAQGPA NLLERRPDVI AAERRLAASS ARIGVATAEY YPKVSLSALL GFESLSAGKL FTAQAFQPAA AAGLRWRLFD FGRVNAEVAQ AKGANAEALA SYRKSMLQAT EDVENALISL AQLESQNREL AVEIRAHERA RNASEDAYKG GVVSLYEVLD EDRQLLAARD QQARVQADNA RAAVSAFRAL GGGWS
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