Gene Rmet_4648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4648 
Symbol 
ID4041509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1278220 
End bp1279374 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content66% 
IMG OID637980069 
Producthypothetical protein 
Protein accessionYP_586779 
Protein GI94313570 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00489554 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCG GCGAATATAC CTATATCTGG CAAGCCCCCG ACTGGCCCAA CTGGCGCTAC 
GACCTCGGCG CGCTAGCCTC CCAGATGGCC GAGGTCAGTC GCGCCCAAGG CATGTTGATG
GGGAGACTGG CAGACCTCGG CATGGGGCTG CGGGACCAGG CGTGCCTGGC GGCGCTGACC
GACGACGTAG TCAAGACCAG TGAAATCGAG GGCGAGCATC TCAGCGTGCA TTCGGTGCGC
TCGTCCATCG CACGACGGCT CGGTGTTGAA ATCGGCGCGC TGGCGCCCGT CGATCGACAT
GTCGATGGCG TCGTCGAAAT GGTGCTGGAC GCCACCACCA ACAGCCAGGC GCCGGTGACC
CAGGCGCGGC TGTTCGGCTG GCACGCGGCG CTGTTTCCAA CCGGCTACTC GGGCCTGTCG
CGGATCAACG TCGCCCACTG GCGCGACGAC TCGGCGGGGC CCATGCAGGT GGTTTCCGGC
CCGATCGGCC GACAGCGCGT GCATTTCGAA GCGCCGCCCG CCGAACGTCT GCCAGCGGAG
ACAGACCGTT TCCTGGCGTG GATCAACGCC CCGTCTGGTG AAGCCCCGTT GATCCGCGCC
GGCCTTGCTC ACCTGTGGTT CGTGACACTG CACCCGTTCG ACGATGGCAA TGGCCGTATC
GCGCGCGCCA TCGGCGATCT GATGCTGGCG CGGGCCGACG GCAGCACGCA ACGCTTCTAC
AGCCTGTCGG CCCAGATCCA GCGCGAACGC AACGCGTACT ACGACATCCT CGAACGGACG
CAGAAGGACG CGATGGACGT CACGCCGTGG TTGTCATGGT TCCTTGAAAC GTTGCACCGC
GCGGTGGATC AAGCGCAGGT CACGCTCGAC GACGTCCTGG CCAAGTCGCG CTTCTGGCAG
CACTGGGGCA CGCAGGCGCT CAACGCCCGG CAGATCAAGG TGTTGAACCG GTTGCTGGAC
GGATTCGACG GCAAGCTCAC GAGCAGCAAA TGGGCGGCCA TCGCCAAATG CTCCAGCGAT
ACCGCGCTGC GGGACCTTAA CGATCTGGTC GAGCGGGGGA TGCTGCGCAA GGCGGCGGCG
GGCGGCCGAA GCACCAGCTA CGAGTTGAAC GATGTGCCAG GCGCTCCTGC CACGCGCGGC
GACGGCAATC GCTGA
 
Protein sequence
MNRGEYTYIW QAPDWPNWRY DLGALASQMA EVSRAQGMLM GRLADLGMGL RDQACLAALT 
DDVVKTSEIE GEHLSVHSVR SSIARRLGVE IGALAPVDRH VDGVVEMVLD ATTNSQAPVT
QARLFGWHAA LFPTGYSGLS RINVAHWRDD SAGPMQVVSG PIGRQRVHFE APPAERLPAE
TDRFLAWINA PSGEAPLIRA GLAHLWFVTL HPFDDGNGRI ARAIGDLMLA RADGSTQRFY
SLSAQIQRER NAYYDILERT QKDAMDVTPW LSWFLETLHR AVDQAQVTLD DVLAKSRFWQ
HWGTQALNAR QIKVLNRLLD GFDGKLTSSK WAAIAKCSSD TALRDLNDLV ERGMLRKAAA
GGRSTSYELN DVPGAPATRG DGNR