| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4614 |
|---|
| Symbol | |
|---|
| ID | 4041475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1240121 |
|---|
| End bp | 1240873 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637980035 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_586745 |
|---|
| Protein GI | 94313536 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAGA CACTGCTCGG ACTGGACGGC AAGCGGGCGC TGGTCACCGG CGCCTCGAGC
GGGCTCGGCG CGCATTTTGC GCAACGGCTG GCCGCGCACG GCGCGGAAGT GGTGCTTGCG
GCACGGCGAG TGGATGCGCT GCAATCGGTC GCGAAACAGC TGGAGCCGTA TGGCCGCGCC
CGTTGCGTGG CGCTCGACGT CACCAGCGCA TCGTCGCGCG CGGCGATGGT GGAAGAAGCG
GGCCCCATCG ACATCCTGGT CAACAACGCC GGGCTGGTTC GCGAGGGCGC TGCCCTCAAA
CATTCCGAAG AAGACTGGGA CGTGGTGCTG GACACCAACC TCAAGGGCAT GTTCTTCATG
GCGCAGGCGC TGGCCTCGGG GATGCGCGAA CGCGGCGGCG GGAGCATCAT CAACGTGGCG
TCGATTCTCG GACTGCGGCA AGCGGGCGGA GTCGTGTCCT ATGCCGTGTC CAAGGCAGGC
GTCGTGCAAC TGACGCGGAC ACTGGCGCTG GAATGGGCAC GCCACGGCAT TCGCGTGAAT
GCCCTCGCGC CCGGATACAT CGATACTGAA ATCAATCACG ACTTCTGGCA GACCGATGCC
GGCAAGGCGC TCATCCAACG CATTCCGCAG CGCCGGTTGG GGCAGCCCGA TGATCTCGAC
GGCCCGCTGT TGCTGCTGGC ATCCGATGCC TCGCGCTACA TGACGGGCGC TGTGCTGCCG
GTCGACGGCG GGCATCTGGT CAATACACTT TGA
|
|---|
| Protein sequence | MKETLLGLDG KRALVTGASS GLGAHFAQRL AAHGAEVVLA ARRVDALQSV AKQLEPYGRA
RCVALDVTSA SSRAAMVEEA GPIDILVNNA GLVREGAALK HSEEDWDVVL DTNLKGMFFM
AQALASGMRE RGGGSIINVA SILGLRQAGG VVSYAVSKAG VVQLTRTLAL EWARHGIRVN
ALAPGYIDTE INHDFWQTDA GKALIQRIPQ RRLGQPDDLD GPLLLLASDA SRYMTGAVLP
VDGGHLVNTL
|
|---|
| |