| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4497 |
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| Symbol | ffcA1 |
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| ID | 4041356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1097263 |
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| End bp | 1099497 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979919 |
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| Product | ferric siderophore receptor protein (TonB-dependent siderophore receptor) |
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| Protein accession | YP_586631 |
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| Protein GI | 94313422 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00504252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0702404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCAC ACCGATCCCG CCATCTGTCA TCCCGCACCA GCACCCAGTC CGCATGCCTC
CCTTCGCCCA AGCCACTTGC TGCCGCGCTC CATCAGGCGA TGCTCTGTCT TGCCGTCGGC
TCGGGTGGCA TGTCGATCAA CGCCATCGCG CAGACTTCCA CGGACAAGGC TCCGGAAACC
ACCCTTCCTG CAGTGACGGT GAGCGCCGTG GCCGCCAGTG ATTCCACCGA TCTCCCGGCA
GCCTATGCGG GCGGGCAAAC CGCGCGCGGC GGCCGCCTCG GGATGCTCGG CAACCGTGGC
AGCCTGGATA CCCCGTTCTC CACCACCAGC TACACGGCCC AGCGCATCGA GGATCAACAG
GCCGTGACCC TGGCCGACGT GCTCAACGCG GACCCTTCGA TTCGTTTCAC CGGCCAGACT
GGCGGTGTCA CCGACTCGTT CATGATTCGC GGCTTCCCGA TCAATGAAGG CAACCTGTCG
GAAGTCGCGT TCGACGGCGT GTATGGCGTT TCGCCGAACT ACCATCTCTT TCCTGAATAC
ATGGAGCGCG TCGAGGTCCT CAAGGGGCCG GCCGCGATGC TCTACGGGAT GTCGCCCAAC
AGCGGTGTGG GGGGCGTGGT GAACCTCGTT CCCAAGCGGG CGGGTGCCAC GGACCTGACA
CGCTTCACGC TCGACTATGC GTCGGACGCC CAAGTGGGCG GGGCCGTTGA CTTGAGCCGT
CGCTGGGGCA ACGACAAGGA GTGGGGCGTT CGCTTCAATG GCTTGCACCG CCAGGGGCCC
ACGCCGCTGG ACGACCAGAA GTCACGCAGC GAGGTGGCGG CCGTATCGCT TGACTATCAC
GGCGACCGTC TGCGGGCATC GCTCGACCTG ATCGAGCAGT ACCAGTGGAT CGATGCGCCG
ACGCGCCCGT TTCTGGTGGC TCCTGGCATC GAAGTGCCGG CGGCACCCGA TGGTCGGCGT
AACGTCACGC AGCCTTGGGG ATGGTGGAAG TCCAACGACG TCTCGACGCT GTTGCGCGTC
GAATATGACG TGGCGGACAA CGTCACTGTC TATGCCGATG CCGGCGGGAC GCGGTCCGAC
GTGTCCCGCC TCTCGGACCA GACCCCGACA ATCCTCAACG CGGCAGGCGA TACTTCCGCC
GCAGTGCAAA ACTGGAGGTT TCAGATCAAC CGGATGTCGT TCGATACCGG CGTGCGCGCG
AAGTTCGACA CCGGTCCGGT CAAGCATGCA CTTGCGTTGC AGGGCAATCT CTATTCGGAT
CGTATTGCCA ACGCCAACGT CGCGGGAACG CCGGTCCGCT CGAATATCTA CCACCCGGTG
GTGAGCCCCG AGCAGTCGAT CGCGCCGCCG AGCTTTGTTC CAAAGGTGTC GGATTCCACG
CTCTCCGGCG TAGCCGTGGT CGACACGGTC AGCACCATGG ATGATCGCGT GGCCCTGACG
CTTGGCTTGC GGTATCAACA GGTCGAGTCG AACAACTACA ACACCGCAAC CGGCGCAAAG
TCGTCCTCGT ATGACGAGAA CGCTGTGACG CCGCTGGCCG GCATCGTCTT CAGGCCATGG
CGCAATGTTT CCTTCTATGC GAACTATGTC GAGGGGCTGA GCAAGGGTGA TATCGCACCG
GCCACTGCTT CGAATGCAGG TCAGGTATTC GCCCCCTACA AGACGAAGCA GCAAGAGGTC
GGCGTCAAGG TCGATGCCGG ATCCATCATG GCCACGCTGG CAGCCTTCCG CATGACCAAG
CCGAGCGGCC AGTTGTTCGG CACGGTTTAC GCTGTGGACA GCGAACAACG AAATCAGGGG
CTGGAGCTGA CTGTCTCTGG CGAAGTGGTG CGGCGTGTTC GGCTGCTGGG CGGCATTACC
TGGCTGGACG GCAAGCTGAC CAAGACCAAT AGCACTGCGA CGCAGGGCAA CCGGCCGGTG
GGCGTACCGG ACTTCATGGC CAATCTTGGC GCCGAATGGG ACCTGCCCTG GCTGCAGGGC
CTGACGTTGA CTGGCGCGCT CAACTACACG GGTCGCACCT ACGTCAACCA GGCCAACACG
CAGTCGGTGC CGTCGTGGAC CACCGTCGAC GTTGGGGCTC GCTACCGGAC GAAGGTGTCG
GGCAAGACCA CCACGTTCCG GGCCACGGTC ATCAATGCCT TCGACAAGCA TTACTGGTCG
GGCGTGGCTT CTTACAGCAC GATCTCGCAG GGCGCACCGC GCACGTTCCT CGGCTCGGTG
ACGGTGGACT TCTGA
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| Protein sequence | MSSHRSRHLS SRTSTQSACL PSPKPLAAAL HQAMLCLAVG SGGMSINAIA QTSTDKAPET
TLPAVTVSAV AASDSTDLPA AYAGGQTARG GRLGMLGNRG SLDTPFSTTS YTAQRIEDQQ
AVTLADVLNA DPSIRFTGQT GGVTDSFMIR GFPINEGNLS EVAFDGVYGV SPNYHLFPEY
MERVEVLKGP AAMLYGMSPN SGVGGVVNLV PKRAGATDLT RFTLDYASDA QVGGAVDLSR
RWGNDKEWGV RFNGLHRQGP TPLDDQKSRS EVAAVSLDYH GDRLRASLDL IEQYQWIDAP
TRPFLVAPGI EVPAAPDGRR NVTQPWGWWK SNDVSTLLRV EYDVADNVTV YADAGGTRSD
VSRLSDQTPT ILNAAGDTSA AVQNWRFQIN RMSFDTGVRA KFDTGPVKHA LALQGNLYSD
RIANANVAGT PVRSNIYHPV VSPEQSIAPP SFVPKVSDST LSGVAVVDTV STMDDRVALT
LGLRYQQVES NNYNTATGAK SSSYDENAVT PLAGIVFRPW RNVSFYANYV EGLSKGDIAP
ATASNAGQVF APYKTKQQEV GVKVDAGSIM ATLAAFRMTK PSGQLFGTVY AVDSEQRNQG
LELTVSGEVV RRVRLLGGIT WLDGKLTKTN STATQGNRPV GVPDFMANLG AEWDLPWLQG
LTLTGALNYT GRTYVNQANT QSVPSWTTVD VGARYRTKVS GKTTTFRATV INAFDKHYWS
GVASYSTISQ GAPRTFLGSV TVDF
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