| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4395 |
|---|
| Symbol | uspA9 |
|---|
| ID | 4041253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 992150 |
|---|
| End bp | 992644 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979816 |
|---|
| Product | universal stress protein UspA |
|---|
| Protein accession | YP_586529 |
|---|
| Protein GI | 94313320 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.124166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.25513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGCA ACATCATGGT CCCGATCGAC GATAGCCACT GCTCGTCCCG CGCGCTGGAC
GAAGCCGTCC GGCTGGCCCG CGCCACCGGT TCAAATCTCG AGATCATCCA TGTCATCGAC
TACGGTTTCC TTAGGGTGCG CGCGCATGGT GGAGAACTGG AGGAGGAGCA CCAGCATCGC
GTGGCGGCCG GCAATGCGCT GCTCGTCAAG GCCCGGCACC ACGCCGAGCG CGCCGGGATC
AAGTTCACCG AGCGGCTGCT CGACGATAAG TCCACGCTCG GCGACGTTGC GAACCGGCTG
ATCCATGACA TCCAGGACAG CAAGCCTGAC CTGGTGGTCA TCGGCACCCA CGGCAAGAGC
GGGCTGCAGC GCGTCGTGCT TGGCAGCGTG GCCGAAACCC TGGTGCGCCA CGCTTCCGTT
CCCGTATTGG TGGTGCGTGG GGACATTCCG CTGGCCGAGG AAGTGGCCGC CGGCCAAAGC
ACCACTTCCG CGTAA
|
|---|
| Protein sequence | MYRNIMVPID DSHCSSRALD EAVRLARATG SNLEIIHVID YGFLRVRAHG GELEEEHQHR
VAAGNALLVK ARHHAERAGI KFTERLLDDK STLGDVANRL IHDIQDSKPD LVVIGTHGKS
GLQRVVLGSV AETLVRHASV PVLVVRGDIP LAEEVAAGQS TTSA
|
|---|
| |