| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4278 |
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| Symbol | |
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| ID | 4041136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 868092 |
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| End bp | 869543 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979700 |
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| Product | NodT family outer membrane lipoprotein |
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| Protein accession | YP_586413 |
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| Protein GI | 94313204 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0872817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTCG CTGCCCCCCC CGCTCGTCTC GTTTCCTGCT GCTGCGCGGC TGCCCTGGCG
TTGGCCGGCT GCGCCGATAC GGGCGGGATC GCTCCAGCGT CCACGCTCAT CGATGCTGCC
AGCGTTGACC CCGGAACGGC ATTGCGCGCC ACCCAGGGCG ATGCAGGCTG GCCACAATTA
GCCTGGTGGA AACGCATGGG GGACCCGAAC CTGGATGCGT TGGTGACGCA ATCTGTTGGC
GGCAATCCTG ATATGCGCAT TGCACTGGCC CGTGGCCAAC TGGCCGAAAG CGCAGCCCGC
ATAGCCGGCG CGGCGACTGA ACCTGGCATA AGCACGGGCG GAGCCTTCGG CCGCACGCGC
TTTCCGCGCC TGGCCACCCC GCAGCCCATC GGCGGCCATA CCACTTGGAA CAACCATGTC
AGTGTCGATC TCGCCTACGA CCTGGACCTG TGGGGCCGCA ACCGCGCCAT CCTTCAGGCC
GCGCTGGACG GTGTCCAGGC GACGGCCGCA GAAGCCCGCA CGGTCCAGAT CAACCTGGAA
ACGTCCGTTG TGAGGGCCTA TGTGGATCTG GCGCTGCAGT ACGCCTTGCT CGACGTAAAC
CAGGCAAACC TCGTGCGTCA GCGCAATATC TATGACATCG TGCACAAGCG CGCCAGCCGC
GGCCTTGCTA GCGAACTGGA GGTAAGCCAG GCGCAGACGC AGATTCCTGC GCTGCTCGCG
CAAGTGCAGC AGTCCGAGCG GCAAGTCGCG CTGGCGAAAA ACCAGATTGC CATCCTCAGC
GGCCAGGGCC CCGGCGCGGG CGAAAGGCTC CTTCGCCCCC GCCTACTGCT GGAGACGCCG
GTAGCAGTGC CGTCCTCACT ACCGGCCGAA CTCGTCGGGC ACCGTCCCGA TGTGGTGGCG
CAGCGTTGGC GCGTGGAAGC CGCGGCGCAC GGCATCAAAG CCGCGAAGGC CGACTTTTAT
CCGAACATTG ACCTGGTGGC GAGCATCGGG CTGGCTTCGG CCGCATTCGG CAATTTCTTT
ACCTTTGTCA GCCGCGACGC AGTGGGCCAC AACGTCGGCG CGGCTATCTC GCTGCCTCTG
TTCGACGGTG GACGAAGACA GGGAAACTAC GGCGTAGCCA CTGCCAGCTA TGACTTGGCG
GTAGAGACCT ACAACAAGAC TGTCCTTGCC GCCTTCCAGA GCGTGGCAGA TGAGGTGATC
TCGCTGCGTT CGCTTGGGGA CCAACAGCAG GATATCGAGG CATCGCTGAA ATCTGCGCAG
CGCGCGTATG AGCTGGCCGA GAAAGGTTAC CGGGGCGGCT TCACCGATTA CCTGAACGTA
CTCGCCACCG AAAGTGAACT CAGACGGCAG CAGCAAGCCT TGGCACTGGT GCAGGCCGCG
CGGCTGGACA CCTGGGCGCG CCTGATGCAG GCCCTGGGCG GGGGATTCGA CGCCGCAATG
GACCAAGATT GA
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| Protein sequence | MVFAAPPARL VSCCCAAALA LAGCADTGGI APASTLIDAA SVDPGTALRA TQGDAGWPQL
AWWKRMGDPN LDALVTQSVG GNPDMRIALA RGQLAESAAR IAGAATEPGI STGGAFGRTR
FPRLATPQPI GGHTTWNNHV SVDLAYDLDL WGRNRAILQA ALDGVQATAA EARTVQINLE
TSVVRAYVDL ALQYALLDVN QANLVRQRNI YDIVHKRASR GLASELEVSQ AQTQIPALLA
QVQQSERQVA LAKNQIAILS GQGPGAGERL LRPRLLLETP VAVPSSLPAE LVGHRPDVVA
QRWRVEAAAH GIKAAKADFY PNIDLVASIG LASAAFGNFF TFVSRDAVGH NVGAAISLPL
FDGGRRQGNY GVATASYDLA VETYNKTVLA AFQSVADEVI SLRSLGDQQQ DIEASLKSAQ
RAYELAEKGY RGGFTDYLNV LATESELRRQ QQALALVQAA RLDTWARLMQ ALGGGFDAAM
DQD
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