| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4269 |
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| Symbol | |
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| ID | 4041127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 859545 |
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| End bp | 861164 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979691 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_586404 |
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| Protein GI | 94313195 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.772082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAT CCGACAACCT GATCGAAGCT CAGGAGTTGT CGCCGCTGGA GGTGCTACGG
CAATACCGCG CGCACGACTT CACGCTGTCA GCGTTCCTGG CAGCACGCGT GGCACAGCAT
CCCGACAAGC CTGCGTTGCT GTTCGAGGGA GAGACATGGA GCTATGGCGA ACTGGCTGCG
CGCATCGCAC GCACCGCGGC GTGGCTCAGC CACGATATGC ACATCCGCGC CGGCGACCGT
GTTGGTGTGC TGTCCGCCAA CCATCCGTCC ACCGTCGTGC TGATGTTCGC GCTGGCGCAG
CTTGGCGCCA CGCTGGTTCC GGCCAATCCC GACTACCGGC TGGATGAGGC GTTGTACGTC
TTCGAGCATG CGCAGATCTG TGGGCTGATC TGTTCGCCGA ACACGCTCGA CACGGCCGCG
GCCGTCGTGT CGCAGCTTGG CGGCGATGTC TGGCTGCGTG CCAATGAGGC CGGCGGGCAC
GGACAGGCAC TGACCGGCGA ATCGGAAGCC GATACCGAAC TGCGGGCCGA GGCCGCCTCT
ACGGCGATGA TTATCTATAC GTCGGGCACG ACCGGCTTTC CCAAAGGCGC CATGCACGGC
CAGCGTGGCT ACGTGCTGAC GGCCGAAGCT TTTGTCGGCC GCATGCACCT GCAGCCGAAC
GAACGCGTGA TGTGCGTGAT GCCGCTGTTC CACATCAACG CGCTGATGTA CTCGGTAGGC
GGCGCGCTGG CTTGCGGTGG CTGCCTGGTG CTGGTGCGCC GGTTCTCGGC GTCGTCGTTC
TGGCGCTTAG CGGCGGAAAG CGGCGCGACG GAGGTCAACT TGGTCGCGGC AGCAGGTAGC
ATCCTCGCGC GGCGTCCGCG CGAGGAGTTC GTGCCCGGCC ACCGGATCTC CAAGATGTTT
ATCGCGCCGC AGACGAGCGA GATGGTGAGC GCAATGCGCC ATGAGTTTCA CGTGGCGCGA
CTGATTGAAT GCTATGGCAT GACGGAGATC CCAGGAGTCA TTGCCAACCC GTTCCATGGC
CCACACAAGC TGGGCACGAT GGGCCTGATC TCACGCCACC CCGATCCAGA TATCTCCCCG
CCTCAGGCGC GCATTATTGG CGAAGACGGG AAGGATGTCG CCGCCGGTGA TTCGGGCGAA
CTGCTGATCC GCACACCGAC CCTAATGCAG GGCTACTACC GCGACACCGC TCAGACCGAC
GCGGCGTTCC GCGACGGGTG GTTCGCCACC GGCGACCTGG TGCGCCAGGA CGACGACGGC
TACTACGTTT TCGTCGCACG CAAGAAGGAC GTGATCCGTC GCAAGGGAGA AAACGTTTCG
GGCGCGGAAC TCGATCGCGT GTTTGGTGAG CATCCTGCGG TGGAGGAGGC CGCGGCAATC
GGCGTACCGG CCGAGCTTGG GGAAGAAGAG ATCCTGCTGG CCGTGCAACT GAGAGCGGGC
TGGGAAGTCG GCGCGACCGA GTTGGTCGAC TGGGCGCGCG ACCGCCTGGC CGCGCACAAG
CTGCCGCGCT TCGTCGTGAA GGTCGATCAA ATTCCACATA CCCCCACGCA CAAGCCGGCC
AAGCACCGGC TGAAGGCAGA CGCGTGCCTG CTGGCGCGCG CGACGGATGT TGCCGGCTGA
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| Protein sequence | MNPSDNLIEA QELSPLEVLR QYRAHDFTLS AFLAARVAQH PDKPALLFEG ETWSYGELAA
RIARTAAWLS HDMHIRAGDR VGVLSANHPS TVVLMFALAQ LGATLVPANP DYRLDEALYV
FEHAQICGLI CSPNTLDTAA AVVSQLGGDV WLRANEAGGH GQALTGESEA DTELRAEAAS
TAMIIYTSGT TGFPKGAMHG QRGYVLTAEA FVGRMHLQPN ERVMCVMPLF HINALMYSVG
GALACGGCLV LVRRFSASSF WRLAAESGAT EVNLVAAAGS ILARRPREEF VPGHRISKMF
IAPQTSEMVS AMRHEFHVAR LIECYGMTEI PGVIANPFHG PHKLGTMGLI SRHPDPDISP
PQARIIGEDG KDVAAGDSGE LLIRTPTLMQ GYYRDTAQTD AAFRDGWFAT GDLVRQDDDG
YYVFVARKKD VIRRKGENVS GAELDRVFGE HPAVEEAAAI GVPAELGEEE ILLAVQLRAG
WEVGATELVD WARDRLAAHK LPRFVVKVDQ IPHTPTHKPA KHRLKADACL LARATDVAG
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