| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4252 |
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| Symbol | htrE |
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| ID | 4041110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 838107 |
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| End bp | 840659 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979674 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_586387 |
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| Protein GI | 94313178 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.22475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAGT CATCTCCAAC TCTCCCAGTG CGCCGTCAGA TCAGTCTGGC TGCGTGTCTG
CTGGTAGCCA GCGCGGCCGC CATGGCCGCC GACGGCGGGA GCCTGGTGGC TGAGGCGAAG
TTCAGCAGCA TGTTTCTGCG CCAGTCACCC GGCGAGCAGA TCGATCTGAG CCGCTTCAAC
CGGGGAAACG CGGCACTGGC CGGCACTTAC CGCGCCGACC TGTATGTCAA CCAGACCTGG
ATCGGCCGCG CCGACGTGAC GCTGCGCGCC GTCGACGGGA ATGGCAGTAA TGTCCAACCG
TGCTTTGACC GGGCGCTTCT CGAGCGCATG GGGGTGGATC TGACCAAGCT CAAGCCGCAG
GCCAGCGCAC GCCTGGAGGG CGAGGGGGCT TGCGTCGCGT TGCCGGAGAT CATCGAAGAT
GCAACGGCAA CCTTTGATAA TGGCGAGCAG CGCCTGGACG TGAGCGTGCC GCAGGCGAAC
ATGTCGCGCC AGGCCCGCGG CTATGTGGAT CCGAAGTACT GGGACGAAGG CATCAACGCC
GCGCGTTTGC AGTACAACGC CAATGTGTAT CACAGCGACA GCCAGGGCAT CGCTTCGACC
CAGGGTTACC TGGGTCTGGA CGCCGGCGTG AACATCGGCG CCTGGCGTTT TCATCATCGG
GGAAACTTCA CACACGACCA GCAGACTGGT AATCACTACC AGAGCGTGCA GACGAACTTG
CAACGCTCGA TCGTGCCGCT CAAGAGTCAG CTAGTGATTG GCGAGGCCTT CACCGATGGG
TCGCTGTTCG ACAGCGTGGG CTTCCGTGGC GTGCAGCTGG CCAGCGATGA CCGCATGTAT
CCCGAGTCGC AGCGCGGTTA TGCGCCGATC GTACGTGGCA TTGCCCAGAG CAACGCGCGG
GTGCAGATCC GCCAGAATGG CAACATCCTC TATGACACCA CGGTTTCTGC CGGTCCGTTC
GAGATCAACG ATCTCTATCC GACTGGCTAC GGCGGTGACC TGGAAGTCAG CGTCACCGAG
GCCGACGGCA GCGTGCATGT CTCGCGTGTG CCCTACGCGG CCGCCGTCAA CGCGCTGCGC
CCCGGTGTCA CGCGCTATAG CGTCACGGCG GGCCAGTACC GCAATCCGAG CGTTCATATC
TCGCCGCTCC TGCTGCAGGG CACGGTACAG CACGGTTTCA CCAATCTCTT CACCGGCTAC
GGAGGCTTCG TGGCATCGCC TCACTACATC GCCGGCCTGT TGGGGGCAGC GCTGAACACC
GACTATGGCG CCTTCGGCGC GGACATCACC CATGCCACCA CGTGGCTGGT TAATGAGCCC
AGCCGCAGTG GCCAGAGCGT GCGCCTTTCC TACAGCAAGC TGGTGCAGCC GACCAACACC
AACCTTACGC TGGCCGCTTA CCGTTACTCC AGCGGAGGCT ATCTGGGTCT GGCCGACGCG
ATGAACCTGC GGGACCTGGA TGAACGCGGC ATGGCCTCTG CCATGAGTGG CATCCAGCGC
GGTAGGTTCC AGGTCACTGT CAACCAGAAC CTCAGGCAGG GCTGGGGCAA CTTCTATCTG
TCGGGTTCTG TGCAGGACTA CTGGAACCGC AATGGCCGCG ATACCCAGCT CCAGGCTGGG
TACAACAACA GCTACAAGCG TATCAACTAC GGCGTCTCGG TCTCACGCCA GCTCAACGTC
ACGACCAACA AGTGGGACAA CCGCGTGATG CTCAACGTGG GCATCCCGCT GGGCAAGAGT
CCGCGCGCGC CGTATTCGAT GACCAGCCTG CAGCAGGATT CCTCGGGCAG CACCAGTCTG
CACGAAACGG TGACGGGCAC GCTTGGCAGG GACAACGCCG TGGCCTACGG TATCAACGTG
GGCCGCAACA GCGGCAATGG GGCGGCCAGC ACCAGCGTAG GTGGCAATGT GTCCTATGTA
TCGCCGGTGA CGACGCTCAG CGCGAGTGCG AGCAGGAGCA GCAATTACAC GCAGATGAGC
GCAGGGCTGG CCGGCGGCAT CGTGGCGTAC GCGGGGGGCG TGGCGTTCAC ACCGAGCCTG
GGCGATACGG TGGCGGTCGT GGAGGCCAAG GATGCGGCCG GCGCGCGGCT GACCAACGGC
AGCGGCCTGC GCGTGGATCC TTGGGGCCAT GCGGTGGTAT CGAACCTGAC GCCGTTTGCG
CGCAATCAGG TCGAGATTGA TCCACAGGGA CTGCCGATGA ATGTGGAGTT GAAGTCGACC
ATGCAGCAGG TGGCGCCGAC CGCCGGGGCC ATCGTGAAGC TGAAGTTCGA CACCGAGAAC
GCCGGCCGCA TGGCGATCCT CGAGGTCAGG CGTGCTGATG GCAAGCCGTT GCCGTTTGGG
GCCGAGGTGC GGGACGCGGG TGGCCAGCCT GTGGGCACGG TGGGTCAGGG CGGGCGCATC
ATCGCGCGCG GGCTCAAGAC CGACAGCGGC ACCCTCAGCG TGGCGCTGGG GGAGGACGCA
GCCAAATCAT GCCAACTGCG CTACCAGTTG CCTCAGGAGC GGAACGACCG CCCCGCTTCG
GTGGCCCTGA TGCAGGCGAC GTGCGCGGAA TGA
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| Protein sequence | MRQSSPTLPV RRQISLAACL LVASAAAMAA DGGSLVAEAK FSSMFLRQSP GEQIDLSRFN
RGNAALAGTY RADLYVNQTW IGRADVTLRA VDGNGSNVQP CFDRALLERM GVDLTKLKPQ
ASARLEGEGA CVALPEIIED ATATFDNGEQ RLDVSVPQAN MSRQARGYVD PKYWDEGINA
ARLQYNANVY HSDSQGIAST QGYLGLDAGV NIGAWRFHHR GNFTHDQQTG NHYQSVQTNL
QRSIVPLKSQ LVIGEAFTDG SLFDSVGFRG VQLASDDRMY PESQRGYAPI VRGIAQSNAR
VQIRQNGNIL YDTTVSAGPF EINDLYPTGY GGDLEVSVTE ADGSVHVSRV PYAAAVNALR
PGVTRYSVTA GQYRNPSVHI SPLLLQGTVQ HGFTNLFTGY GGFVASPHYI AGLLGAALNT
DYGAFGADIT HATTWLVNEP SRSGQSVRLS YSKLVQPTNT NLTLAAYRYS SGGYLGLADA
MNLRDLDERG MASAMSGIQR GRFQVTVNQN LRQGWGNFYL SGSVQDYWNR NGRDTQLQAG
YNNSYKRINY GVSVSRQLNV TTNKWDNRVM LNVGIPLGKS PRAPYSMTSL QQDSSGSTSL
HETVTGTLGR DNAVAYGINV GRNSGNGAAS TSVGGNVSYV SPVTTLSASA SRSSNYTQMS
AGLAGGIVAY AGGVAFTPSL GDTVAVVEAK DAAGARLTNG SGLRVDPWGH AVVSNLTPFA
RNQVEIDPQG LPMNVELKST MQQVAPTAGA IVKLKFDTEN AGRMAILEVR RADGKPLPFG
AEVRDAGGQP VGTVGQGGRI IARGLKTDSG TLSVALGEDA AKSCQLRYQL PQERNDRPAS
VALMQATCAE
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