| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4229 |
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| Symbol | |
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| ID | 4041087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 814677 |
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| End bp | 815324 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637979652 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_586365 |
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| Protein GI | 94313156 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00851836 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCAAG CCCCCAAAGT ACTGGTCTGC GATGATCACC CCATCATTGT GATCGCCCTC
CGCAGTGAAC TTGCCCGCAT AGGACAGTTC TCGGAGGTGG TCACTGCCTC CAGTGTCAAT
GAGATCCTCA ATGCGCTGAA CGATCCAGAA GTGGGTATTG TCATCACCGA CTTCTCCCTC
AACGAAGCGG GTGACGGGCT GCAACTCATC GGACGCATCA AGCGTATGCG TCCCGATGTA
GCCGTGATCG TGTTCTCTAT GAACGCCTCG CCGCCGGCCG TCCGCGACAT GATAGCCGCG
GGTGCCTCCG CCTTCGTCTC GAAAACCTGC GGTACTCGGG ACGTTGCCGA GGCTTGCCGC
GTTGTCCTTG CGGGCAGGAA GTTCGTTGCT CCGGCCTCGC TGGCGCATCT CCTCGACCAG
GACGACGGAG GCACGCCACA AGCTGCGCTG CAGCGACTAA GCCCGCGTGA GCGAGAGGTA
TTGCGCCTGC TCGCGCAGGG GCTCTCGCTC AGAGAAATCG CGGCGCGTTT TAACCGAAGC
AGGAAAACCA TCAGCGTGCA AAAGTGCGCT GCCATGGCAA AGCTCGGGCT GACGCATGAT
ATGGAGCTCG GACGCTATCT TGCCTCGGCA GACTCAGACG AACTGTAG
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| Protein sequence | MNQAPKVLVC DDHPIIVIAL RSELARIGQF SEVVTASSVN EILNALNDPE VGIVITDFSL
NEAGDGLQLI GRIKRMRPDV AVIVFSMNAS PPAVRDMIAA GASAFVSKTC GTRDVAEACR
VVLAGRKFVA PASLAHLLDQ DDGGTPQAAL QRLSPREREV LRLLAQGLSL REIAARFNRS
RKTISVQKCA AMAKLGLTHD MELGRYLASA DSDEL
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