| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4216 |
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| Symbol | lpdA2 |
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| ID | 4041074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 799845 |
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| End bp | 801641 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979639 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_586352 |
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| Protein GI | 94313143 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGA TCGAAGTGAA GGTGCCGCAG TTGTCCGAAT CTGTCTCGGA AGCCACGCTG
ATGCAGTGGA AGAAGCAAGC CGGCGAGGCC GTCAAACGCG ACGAGATCCT GGTGGAACTG
GAAACCGACA AGGTCACGCT GGAGGTGCCG AGTCCGGCCG ACGGCGTACT GGCAAAGATC
GTCCAGCCCG ATGGCGCCAC GGTCCATACG GACGACGTGA TCGCGGTGGT CGACACCGAG
GGGAAAGCGG TCGCAGCAGC CTCACCCGTG GCCGCTGCAG CGCCGGCATC CGCCCCAGCG
CCCGCACCGG CCCCTGCCCC GGTAGCCGCC GTGGCATCAG GTGGCGCTGG TGCCCCGGCA
TCGGCCAAGG CCGACTTCGA CGTGATCGTG ATCGGCTCCG GCCCGGGTGG ATATATCGCC
GCCATCCGTG CGGCCCAGCT AGGCAAGACG GTAGCCTGCA TCGAGGAATG GAAAGACGAC
GCTGGCAAGC CACGGCTCGG CGGTACCTGC CTGAACGTCG GCTGCATTCC AAGCAAGGCG
CTGCTCGCCT CGTCCGAGTA CTTCGAGCAA GCGAAGCATG GGCTGGCCGA ACATGGTGTG
CAGGTCAAGG GCGTCACACT TGATCTGGCG CAGATGATCC AGCGCAAGGC TGCAATCGTC
GACAAGTTCA CCGGTGGCGT GGAGTTCCTG TTTCGCAAGA ACAAGGTCAC CTGGATCAAG
GGCCATGGCA AGTTCAAGGG GCGGGCCGCG GATGGCGTGA TTACCGTGGA GGCCAGCAAC
GGCGGCGAGA CGACGTCGCA TACGGCACGC AACGTCATCA TCGCAACGGG TTCGAAGGCC
CGCCATCTTT CGGGCGTGCC GGTCGACAAC AAAATCGTCT CCGACAACGA GGGCGCGCTG
TCCTTCGATT CGGTGCCGAA AAAACTCGCA GTGATCGGCG CCGGGGTGAT CGGTCTCGAA
CTCGGCTCGG TATGGCGACG GCTCGGGTCC GAAGTCACGC TGCTGGAAGC CCTGCCCACA
TTCCTCGGCG CGCTTGACGA AGCCGTGGCC AGGGAAGCCG CCAAACAGTT CGGCAAGCAG
GGGCTCACGA TTCACCTTGG TGTCGACATC GGCAATATCG AAGCCACCGC CAAGGGCGTC
AGCATCGCCT ACAAGGACAA GGACGGCGCC GAACAGAAGC TCGTCGCGGA CCGGTTGATC
GTGTCGATCG GGCGCGTGCC GAACACCGAC AATCTGGGTC TGGATGCCGT GGGCCTGGCC
GCCGACGCGC GTGGCTTCAT CCCCGTGGAC GACCAGTGCC GCACCCCGGT GGCGGGCATC
TACGCTATCG GCGATGTCGT GCGCGGCCCG ATGCTCGCCC ACAAGGCCGA GGACGAAGGC
GTCATGGCCG CCGAGGTCAT CGACGGCCAG AAGCCACACA TCGACTACAA CTGCATTCCG
TGGGTGATCT ACACCGAGCC CGAAATCGCC TGGGTGGGCA AGTCAGAAGC CCAGTTGAAG
GCGGAAGGCC GCGAGTTCCG TTCCGGCCAG TTCCCAATGA TGGCAAACGG CCGCGCGCTT
GGGATCGGAC ATCCGGATGG CTTCATCAAG ATGATCGCGG ACGCAAAGAC CGACGAAATC
CTGGGCGTGC ACATCATCTC CGCCAATGCC TCGGATCTGA TCGCCGAGGC CGTGGTCGCC
ATGGAGTTCA AGGCGGCATC GGAGGACATC GGCATGATCT GCCACCCGCA CCCATCACTG
TCCGAGGTCA TGCGCGAGGC TGCGCTGGCG GTGCGAAAGC GGGCGCTCAA TATGTAG
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| Protein sequence | MAAIEVKVPQ LSESVSEATL MQWKKQAGEA VKRDEILVEL ETDKVTLEVP SPADGVLAKI
VQPDGATVHT DDVIAVVDTE GKAVAAASPV AAAAPASAPA PAPAPAPVAA VASGGAGAPA
SAKADFDVIV IGSGPGGYIA AIRAAQLGKT VACIEEWKDD AGKPRLGGTC LNVGCIPSKA
LLASSEYFEQ AKHGLAEHGV QVKGVTLDLA QMIQRKAAIV DKFTGGVEFL FRKNKVTWIK
GHGKFKGRAA DGVITVEASN GGETTSHTAR NVIIATGSKA RHLSGVPVDN KIVSDNEGAL
SFDSVPKKLA VIGAGVIGLE LGSVWRRLGS EVTLLEALPT FLGALDEAVA REAAKQFGKQ
GLTIHLGVDI GNIEATAKGV SIAYKDKDGA EQKLVADRLI VSIGRVPNTD NLGLDAVGLA
ADARGFIPVD DQCRTPVAGI YAIGDVVRGP MLAHKAEDEG VMAAEVIDGQ KPHIDYNCIP
WVIYTEPEIA WVGKSEAQLK AEGREFRSGQ FPMMANGRAL GIGHPDGFIK MIADAKTDEI
LGVHIISANA SDLIAEAVVA MEFKAASEDI GMICHPHPSL SEVMREAALA VRKRALNM
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