| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4213 |
|---|
| Symbol | |
|---|
| ID | 4041071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 797257 |
|---|
| End bp | 798237 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637979636 |
|---|
| Product | extra-cytoplasmic solute receptor |
|---|
| Protein accession | YP_586349 |
|---|
| Protein GI | 94313140 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGAT TCGCCCCCGT TCGATGGCTG GCTACTGCAT TGGCCGCCAC TGGTTTCACG
TTCGCCGCGC AGGCGTCGGC GCAAGGCACT CCGTATCCGG CCAAGCCCGT GCGTGTGGTA
GTGGCCTTCA CCGCAGGCGG CACTACCGAC ATGCTGGCGC GTAGCGTCAG CCAGCAACTT
GCCCAGCGTT TCAAGCAATC CTTCGTGGTG GACAACCGTC CCGGCGCGGG CGGAAATATC
GGCACCGAGT ACGTTGTCCG ATCGCCGGCC GATGGCTACA CCCTGCTGGT CAACTCGGTG
GGGCCGATCT CGATCAACCA GACGCTCTAC AAGCGCCTGA ACTACGACCC GCTGGCCGAT
CTGGTGCCGG TGGTGCAGAT CGCCGACGTG CCGAACGTGC TCGTCGTGCC GGCCGCGCTG
CCGGTAAAGA ACTTCGACGA GTTCGTGGCC TATGCCAAGG CGAACTCGGG CAAGCTCAAC
TACAGCTCGA CCGGGGTGGG GACGTCGTCG CATCTGTCGG GCTTCATGTT CAGTGAACGC
ATCGGTGCCC AGGCCACTCA TGTGCCTTAC AAGGGCGCCG ATGCGCTGAA CGACCTGCTC
TCGGGGCGCG TCCAGTTCAT GTTCGCCACG ATTCCATCGG TGATCTCGCA GATCCAGGCT
GGCAAGCTGC GTGCGCTGGC GGTGACTAGT GCGAAGCGTT CCCGCTCGCT GCCGGATCTG
CCGACGGTGG CGGAGAAGGG CTTCCCCGGT TTCGAGGCTG GCTCGTGGTT CGGCTTCTTC
GCACCGAAGG GCACGCCGGC CGAGGTCGTC ACCCGGGTCA ATCAGGCCGT GAATGAGATC
CTGCCGTCGC TGCAGGCGCA GATGGTTCGT GAAGGCGCCG ATCCGGCCGG CGGCTCGCCG
CAGCAGTTCG GTGATTTCAC GCGCAAGGAA TACGAGAAAT GGAAGGTCGT GGTCAAGGCC
TCCGGTGCCA CTGTCGATTG A
|
|---|
| Protein sequence | MHRFAPVRWL ATALAATGFT FAAQASAQGT PYPAKPVRVV VAFTAGGTTD MLARSVSQQL
AQRFKQSFVV DNRPGAGGNI GTEYVVRSPA DGYTLLVNSV GPISINQTLY KRLNYDPLAD
LVPVVQIADV PNVLVVPAAL PVKNFDEFVA YAKANSGKLN YSSTGVGTSS HLSGFMFSER
IGAQATHVPY KGADALNDLL SGRVQFMFAT IPSVISQIQA GKLRALAVTS AKRSRSLPDL
PTVAEKGFPG FEAGSWFGFF APKGTPAEVV TRVNQAVNEI LPSLQAQMVR EGADPAGGSP
QQFGDFTRKE YEKWKVVVKA SGATVD
|
|---|
| |