| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4149 |
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| Symbol | crtB |
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| ID | 4041007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 724808 |
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| End bp | 725656 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637979572 |
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| Product | phytoene synthase |
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| Protein accession | YP_586285 |
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| Protein GI | 94313076 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.165993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.461254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGGTA CTGAAATCGC AACGCCAGGC GGGCCGATCG CCGGACCCGC CGTGTCATCC
GGAAGCTCGT TCCATGCGGC CATGCGCATC CTGCCCGCTT CGCAGCGGCA GGCCATGTTC
GAGATCTACG CGTTTTGCCG CGCCGTGGAC GACATCGCCG ATGGCGACAC CCAGCACGCC
GACCGCCTCG CCGCGCTGGA ACAGTGGCGC GCCGACATCG CCGCCTGCTA TGCAGGCCAG
GCGCCTGCGG CGCTGCGCCC GCTCGACGAG CAGATCAAGG CGTTCAATCT CCAGCAGCAG
GATTTTTCCG ACGTCATCGA CGGCATGATC ATGGACGTCG TCGCCACGAT CGTCGCGCCG
GATGCCGCCA CGCTGGACAC CTACTGCGAC CGCGTGGCCA GCGCCGTCGG CCGCCTGGCC
GTGCGCGTGT TCGGCCTGGA CGAAGCACCC GGCATCGCGC TGGCGCATCA CCTTGGCCGT
GCGCTGCAGC TGACCAACAT CCTGCGCGAC CTCGACGAGG ACGCCGAGAT CGGCCGTCTG
TACCTGCCGG CCGAGGCCCT GGCCGCCGCC GGCATTCCCG TCGGCAAGCC ATACGACGTC
ATCCATCACC CCGCGATCGC CGAGGTCTGC ACCGGCATCG CGCGCGATGC TCAGGCTCAC
TACGATGCCT CCGCCGCGAT CATGGCGCGC TGCCCGGCGC GCGTGGTGCG TTCGCCGCGC
ATCATGTCCG ATGTCTATCA CGGCATCCTG ACCCGCCTGC TGGCCCGTGG CTGGCAACCG
CCGCGCGCGC GCGTGCGCGT GCCCAAGGCA AAGCTGGTCT GGATTCTGCT CCGACATGCC
ATCGCATGA
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| Protein sequence | MAGTEIATPG GPIAGPAVSS GSSFHAAMRI LPASQRQAMF EIYAFCRAVD DIADGDTQHA
DRLAALEQWR ADIAACYAGQ APAALRPLDE QIKAFNLQQQ DFSDVIDGMI MDVVATIVAP
DAATLDTYCD RVASAVGRLA VRVFGLDEAP GIALAHHLGR ALQLTNILRD LDEDAEIGRL
YLPAEALAAA GIPVGKPYDV IHHPAIAEVC TGIARDAQAH YDASAAIMAR CPARVVRSPR
IMSDVYHGIL TRLLARGWQP PRARVRVPKA KLVWILLRHA IA
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