Gene Rmet_4140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4140 
Symbol 
ID4040998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp714193 
End bp714960 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID637979563 
Productputative methyltransferase 
Protein accessionYP_586276 
Protein GI94313067 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00813352 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA TCCATCATGC TGCCGCCCAG GGCTTTTCTG CCCAGGCCGA TACCTACGCC 
CGTGGGCGTC CCGAATATCC CGCCGAGCTT TCCGGCTGGC TGCGCGACAC GCTTGGCGTG
GCACCCGGCA AGAGCGTTGT CGACCTCGGC GCGGGCACCG GCAAGTTCAC GCGCCTGCTG
GCGCAGACCG GCGCCACGGT GATTGCCGTG GAACCGGTCG ATGCCATGCG CGCGCAACTG
TCGTCGAAAC TGCCGGACGT GCAGGCGCTG GCGGGTAGCG CCGAGTCGAT TCCGCTGCCC
GACGGCAGCG TCGACGCGGT GGTCTGCGCC CAGGCGTTCC ACTGGTTTGC CAACACTGCT
GCCGTGCAGG AAATCCGCCG CGTGCTGAAG CCCGGCGGCA AGCTCGGGCT GGTGTGGAAT
GTCCGCGACG AGTCGGTGGG CTGGGTCGCC AGGCTGACCG AGATCATGAC GCCGTTCGAG
GGCGATGCGC CGCGCTTCTA CAAGGGGGAC TGGAAGAAGG TCTTCCCGGC CGATGGCATG
GGACCGCTCG GTCTGACACG CTTTGCGTAC ACCCACAGCG GCGCGCCGGA ACAGGTGATC
GTCGATCGCG TGATGTCGGT CAGCTTTATC GCGTCGCTGC CGCAGGACCA GCAGGACGCC
GTGCGCGCCC GGTTGCGCGA GGTCATTGCC ACCGACCCGG CGCTGCAGGG GCACGACGTG
GTGTCGTTCC CGTACAGCAC CGAAGCGTAC TGCTGCGAAC GGCTCTGA
 
Protein sequence
MTAIHHAAAQ GFSAQADTYA RGRPEYPAEL SGWLRDTLGV APGKSVVDLG AGTGKFTRLL 
AQTGATVIAV EPVDAMRAQL SSKLPDVQAL AGSAESIPLP DGSVDAVVCA QAFHWFANTA
AVQEIRRVLK PGGKLGLVWN VRDESVGWVA RLTEIMTPFE GDAPRFYKGD WKKVFPADGM
GPLGLTRFAY THSGAPEQVI VDRVMSVSFI ASLPQDQQDA VRARLREVIA TDPALQGHDV
VSFPYSTEAY CCERL