| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4099 |
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| Symbol | caiB |
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| ID | 4040957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 666581 |
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| End bp | 667816 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979522 |
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| Product | acyl-CoA transferase/L-carnitine dehydratase CaiB |
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| Protein accession | YP_586235 |
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| Protein GI | 94313026 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0342589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAA TGGAAGCCAA TAAGTTTCGC CCGCTGGCTG GCGTAAAAGT GCTTGAGTTG
TCACAGATTC TGGCCGGCCC CACCTGTGGG CTGATGCTTG GCGATCTCGG GGCCGACGTG
GTCAAGATCG AGCGATTTCC CGCCGGGGAC GACGCGCGGA AGTACCGCCG GCAGGGCGAC
AGCGGATTGC CGCCTTCCTT CCTGATTGTC AATCGCGGCA AGCGGTCGCT CGGACTCGAC
CTGCGCAAGG AAGAGGGCAA GGCGGTGCTC AAGCGGATGG TTGCCCAGGC CGATGTGCTG
ACCGAGAACT TTCGTCTGGG AGTGATGGAG AAACTGGGCC TTGGCTACGA CGTGCTGCGC
GAGGTGAATC CGGCCCTGAT CTACTGCTCG ATCACCGGAT ACGGACGGAC GGGGCCGCTC
GCCAGCAAAG GTGGTTTCGA CCTGATTCTG CAGGCGTTCT CGGGGCTCAT CAGCGTGACA
GGAGAGCCCG GCCGCGACCC GGTCAAGCCG GGCATGTCGA TCGCCGACGT CAATGCCGGC
ATCCTGGCCG CATTCGGTAT CCTGGCGGCG TACATCAACC GGCTACGCAC GGGCGAGGGC
TCGCGCGTCG AGACCTCGCT GCTGCAGGCA TCGATGCAGC AGCTTTACTG GTACGCGGCG
GCCTACTTCT CGACCGGGGC GATTGCGAAG CCGGTCGGCA CGGCGCATCC GCTCATCGCG
CCTTACCAGG TGTATCAATG CGCTGATGGC GGTATCGCGC TCGGGGGCGC CAATCAGACC
AACTGGGAGC GCATCGCCGA TGTGCTGGGC CATCCGGAGT GGAAGGCCGA TCCGCGTTTC
GACAGCGCGG CGGAAAGACT CGCGCGCCGT GCCGAGCTCG AACTGCTGAT CACCGATGTC
CTGAAGGGCG CGCCGGTGGC GACGTGGGTG GAGCGATTCG ATGCCGTGGG GGTGCCTGTC
GGCCCGGTTC AGAACGTGGC GCAGGCACTG GAGCATCCGC AGGCGAAGGC AGTCGGGATG
GTCGTGGAAG CCCGCAAGCC AGGCGGCGGC ATGACGCGCG CGCTGGGGCT ACCCGTCCTG
TTCGACGGGG GCAACGCCAG TTCGACCGGC CCGGCCCCCG CGCTGGGCGA GCATTCCAGT
TCAGTGCTGC GGGAGTTTGG ATTTGCCGCG GGAGAGATCG AGGACCTGCT GCGCAACGCC
GTGGTCCACG ACTGCGCTCA TCCGGTCGCG GCGTGA
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| Protein sequence | MQKMEANKFR PLAGVKVLEL SQILAGPTCG LMLGDLGADV VKIERFPAGD DARKYRRQGD
SGLPPSFLIV NRGKRSLGLD LRKEEGKAVL KRMVAQADVL TENFRLGVME KLGLGYDVLR
EVNPALIYCS ITGYGRTGPL ASKGGFDLIL QAFSGLISVT GEPGRDPVKP GMSIADVNAG
ILAAFGILAA YINRLRTGEG SRVETSLLQA SMQQLYWYAA AYFSTGAIAK PVGTAHPLIA
PYQVYQCADG GIALGGANQT NWERIADVLG HPEWKADPRF DSAAERLARR AELELLITDV
LKGAPVATWV ERFDAVGVPV GPVQNVAQAL EHPQAKAVGM VVEARKPGGG MTRALGLPVL
FDGGNASSTG PAPALGEHSS SVLREFGFAA GEIEDLLRNA VVHDCAHPVA A
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