| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4089 |
|---|
| Symbol | pqiA3 |
|---|
| ID | 4040947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 657759 |
|---|
| End bp | 659030 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979512 |
|---|
| Product | paraquat-inducible protein A |
|---|
| Protein accession | YP_586225 |
|---|
| Protein GI | 94313016 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
|---|
| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.645916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA CCGATCTGAT CGCCTGCCCC GAATGCGACC TGCTCCAGCG CGCATTGCCC
GTGCCCATCA AGGGCACGCT GCGATGCTGC CGCTGCGACG CCGAACTTGC CCGCAACCAC
CCTGACGGCC TGGAGCAGGC GCTGGCCCTC GCGCTCGGCG CGCTGGTGCT GCTGGGCATT
TCGAATCTCT ATCCGATCGT CGGTCTCTCC GTCAGCGGCA CGCTGGTGCA AACGACACTC
GCTGGCGCAG TGCGCGTGCT GTTTCACGGC GGCATGTGGC CGCTGGCAAT CCTGGTCCTG
ATCACGACCA TCGTGATGCC GGTACTGCAG ACGGTGGGCA TGTTGTGGGT ACTGCTGCCG
CTGCGTCTGG GCCGCAAGCC CTGGTTTGCG CCTCAGGTGC TGAGGCTCTG CCATCAGGCC
GAGTCCTGGG GAATGACCGA GGTGCTGATC CTTGGCCTGC TGGTGGCCCT GGTCAAGCTC
GCGCACATCG CGTCGGTCGT GCCCGGCGTC GCGCTGTGGT CGTTCGGCGC GCTAATGCTC
GTGCTGGTCG GGGCCCATAC CGCCTTCGAC CCGCATTCGC TATGGGTCCG ATTCTCGGAT
GTGCGCACAA CCAGCGGCGC ACGCCCGCAC CTGGAACCGC CAATCGTTTC GGGCCCCATC
ACGGCGGCGC ATTGTGGCCT GCTTTCGTGC CACGATTGCG GATTGCTGAC CAGCGCCCAC
ACGCGCGACC ATGCGCTGGC CTGCCCGCGA TGCGGCGCGA CGCTGCATAG CCGCAAACCC
GCGAGCCTGA CACGCACCTG GGCGTTGCTG ATTTCCGCCG TCGTGCTGTA CATCCCCGCT
AACGTGCTGC CCGTCATGTA CACGAGCTCG CTGTTCGGCG CGGAGAACGA CACGATCCTG
AGTGGTGTCG CATACCTGTG GACGTCAGGA TCGTGGCTGC TCGCGATCGT GGTGTTCATT
GCCAGCATTG CCGTGCCGAT GCTCAAGATC CTCGCGCTCG GCTACCTGGC CTTCTCCACG
CAGTTTCATT CCACCTCCGC GCCGAAGCGC CGCACGAAGA TCTATCGCGT GGTGGAGTTC
GTCGGCCGCT GGTCGATGCT GGATATCTAC GTAATCACCG TGCTCGTCGC ACTGGTGCAA
TTCAAGGCCC TGGCCACGAT CCAGGCCGGC CCCGCCGCCA TCGCCTTCGG CGCGGTGGTG
GTACTGACCA TGTTCGCCGC GATGACATTC GATCCGCGGC TGATCTGGGA TGAAGCGGAG
CATCAACCAT GA
|
|---|
| Protein sequence | MTRTDLIACP ECDLLQRALP VPIKGTLRCC RCDAELARNH PDGLEQALAL ALGALVLLGI
SNLYPIVGLS VSGTLVQTTL AGAVRVLFHG GMWPLAILVL ITTIVMPVLQ TVGMLWVLLP
LRLGRKPWFA PQVLRLCHQA ESWGMTEVLI LGLLVALVKL AHIASVVPGV ALWSFGALML
VLVGAHTAFD PHSLWVRFSD VRTTSGARPH LEPPIVSGPI TAAHCGLLSC HDCGLLTSAH
TRDHALACPR CGATLHSRKP ASLTRTWALL ISAVVLYIPA NVLPVMYTSS LFGAENDTIL
SGVAYLWTSG SWLLAIVVFI ASIAVPMLKI LALGYLAFST QFHSTSAPKR RTKIYRVVEF
VGRWSMLDIY VITVLVALVQ FKALATIQAG PAAIAFGAVV VLTMFAAMTF DPRLIWDEAE
HQP
|
|---|
| |