| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4088 |
|---|
| Symbol | pqiB |
|---|
| ID | 4040946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 656129 |
|---|
| End bp | 657655 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979511 |
|---|
| Product | paraquat-inducible protein B |
|---|
| Protein accession | YP_586224 |
|---|
| Protein GI | 291481512 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3008] Paraquat-inducible protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.141129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGATCA TCGCCGTGCT GATCGGCGGC TGGCTCGCGG TGAAGGCCGT GATCGAACAG
GGACCGACGA TCACCGTCAG CTTCAAGACC GGCGAGGGCC TGGAGGCCGG CAAGACCAAG
ATCAAGTTCA AGGACGTCGA CATCGGCTTG GTCAAGTCGG TGGCGCTTTC CCCCGATAGC
AAGCGCGTGG TGGTGACCGC CGAGATCGCC AAGGACGCCG GACGCCTGCT TGTCGACAAC
ACGCGTTTCT GGGTGGTGCG GCCGCGCATC TCGGGCGGGT CCGTTTCCGG CCTCGGCACA
CTGCTGTCCG GTTCGTACAT CGCCACCGAT GCCGGCACGG CGACGGCGAC GCGCCACGAC
TTTGTCGGGC TCGAGACGCC GCCCGCATTC ACCAGCGACG TGCCGGGCCG CGAGTTCACG
CTAAAGAGCG AGGACGTGGG CTCGCTCGAT GTCGGCTCCC CGGTCTACTT CCGCCGCCTT
CAGGTGGGAC AGATCACCGC GTTCGACCTC GACTCCGACG GGCGTGGCGT CACGCTCAAG
GTGTTCGTGA ATGCCCCGTA CGACCGGTTC GTGCAGCAGG GCACACGCTT CTGGCACGCC
AGCGGCGTTG ACGTGTCGCT CGATACGGGT GGCTTGCGCG TGAACACCCA GTCCGTGGTG
TCGATCCTGA TCGGGGGCAT CGGCTTCGAG ACCCCGTACG AATCGCAGGA CCAACCCGTT
GCAGCGGCAG GATCGACCTT CGCACTGTTC CATGACCGTG TCACCGCACT CAAGCGCCAG
GACAGCGTCG TACATCACTA CGTGGTCAAT TTCACGGACA CGGTGCGCGG ACTGGCCGTT
GGCGCTCCGA TCGAGTTCCG GGGCATCGTG ATCGGCGAGG TCACCGGCAT CTACACACGC
TACGATCCGG TTACGCGCAA ATTCAGCATC CCGGTGGAAA TAAACTTCTA CCCAGGACGG
TTCACGTCGC GTTACCGCAC CGGTGCGGGC GCGGGCCCGG TGACCGAAAC GCCCCGCGAG
CTTGGCGACT TCCTGGTCTC CCAAGGGCTC CGAATGCAGT TGCGGAACGG TAACCTTCTG
ACCGGGCAGC TTTATATCGC GCTGGATTTC TTCCCCAACG CACCCAAGGC CAAGATCAAC
TGGAACGAAA ACCCGCCGGA GTTTCCGTCC ATCCAGGGCG ATCTGCAGTC GCTGCAGCAG
TCCCTGACAC GTGTTGTCGC GCAACTGAAC AGCGTGCCCT TTGCGCAGAT CGGTCAGAAC
ACCAAGGACA TGCTTCGCAA CGCGACCTCG CTATTGACGC GGCTGGACTC GGAGCTCGTG
CCGCAAGCAC GCGACACGCT GGCATCGGCG CGCTCCACGC TCGACTCCGC CAACACCGCG
CTCGGCCCCG ACTCGGCGCT GCAGCAGAAC ACGGCGGACG CCATGAAGGA ACTCGCCCGT
ACGGCCGCCG CGCTCCGCTC GCTTGCCGAC TATCTGGAGC AGCACCCCGA AGCGCTGATA
CGCGGCAAAG CGGAGGACAA GCCATGA
|
|---|
| Protein sequence | MPIIAVLIGG WLAVKAVIEQ GPTITVSFKT GEGLEAGKTK IKFKDVDIGL VKSVALSPDS
KRVVVTAEIA KDAGRLLVDN TRFWVVRPRI SGGSVSGLGT LLSGSYIATD AGTATATRHD
FVGLETPPAF TSDVPGREFT LKSEDVGSLD VGSPVYFRRL QVGQITAFDL DSDGRGVTLK
VFVNAPYDRF VQQGTRFWHA SGVDVSLDTG GLRVNTQSVV SILIGGIGFE TPYESQDQPV
AAAGSTFALF HDRVTALKRQ DSVVHHYVVN FTDTVRGLAV GAPIEFRGIV IGEVTGIYTR
YDPVTRKFSI PVEINFYPGR FTSRYRTGAG AGPVTETPRE LGDFLVSQGL RMQLRNGNLL
TGQLYIALDF FPNAPKAKIN WNENPPEFPS IQGDLQSLQQ SLTRVVAQLN SVPFAQIGQN
TKDMLRNATS LLTRLDSELV PQARDTLASA RSTLDSANTA LGPDSALQQN TADAMKELAR
TAAALRSLAD YLEQHPEALI RGKAEDKP
|
|---|
| |