Gene Rmet_4085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4085 
SymbolphoA2 
ID4040943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp653226 
End bp654629 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content65% 
IMG OID637979508 
Productalkaline phosphatase 
Protein accessionYP_586221 
Protein GI94313012 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000151439 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CTACCCGTAT CGGAATGCTG GCGGCCGCGG CGGCCAGCGC TTGCCTGACG 
ATGCCCGCGG CGCAAGCCGC TGGCGAGGCC AAGAACGTCA TCTTCTTCCT GGGCGACGGC
ATGGGCCCCG CCACCGTTAC CGCATCGCGT ATCTACAAGT ACGGCGAGTC GGGCAAGCTG
ACGATGGAAT CGCTGAAGCG CACCGCGCGC ATCAAGACGT TCTCCAACGA CGCGCAAACC
ACCGACAGCG CACCGTCGAT GGCTGCCTAC ATGACCGGCG TGAAGATGAA CAACGAGGTC
ATCTCGATGT CTCCGGACAC GAAGGCGACC GCGCCGGGCA CAGACGTCAA CGGCAACAAG
ACCATCAACA ACTGCCTGCC GACCAACGGT ACTTCGGTGC CGACGCTGCT GGAACTGGCC
AAGGCGCGCG GCAAGGCAAC CGGCGCTATC ACCACGACCG AGCTGACGCA CGCCACGCCG
GCCGCCACGT ACTCCCACAT CTGCCATCGC GATGCGCAGT ACGACATCGC CGCGCAAGCG
GTGCCGGGTG GCGCGGGTTT CAATACGGCG CTGGGTGACG GTGTCGACGT GCTGATGGGC
GGCGGACGCA ACCACTGGAC GCCGTTTGAC GCCACGGCCA ACAAGAAGGG TCGTGCCGAT
GGCCGCAATC TGCTGACGGA GTTTGCCGCC AAGGGCTACG CCGTGGCCGC CACGCGCGAC
CAGATGATGC AGGCCAGCGG CAACAAGCTG ATTGGTCTGT TCAGCACGAC GAGCCATCTC
GAGTACGAGA TCGACCGCGT GGCGGGCAAG GGCGAAGGCG CTACCCAGCC GAGCCTGGCC
GACATGACCG CCAAGGCGAT CGAGCTGCTG TCGAAGAATG GCAATGGCTA CTTCCTGATG
GTCGAGGGTG GCCGTATCGA CCACGCGCTG CACGGCACCA ACGCCAAGCG TGCGCTGGAA
GACACCATCG CCTTCGACGA CGCCATCAAG CGCGCGCTTT CGATGGTTGA TCTGTCGAAC
ACGATCATCG TGGTCACCGC CGACCACGAT CACACGATGA CGATCAACGG CTACTCGCAC
CGCGGCAACC CGATCCTGGC CACGGCCACC GACTACAAGA CCAAGAAGAC CGCCCTGGCG
GCCGACGGTC TGCCCTACAC GACGCTGGTG TTCGGCAACG GTGGCACCCC GCGCAAGGCT
ACCCGCGACA ACCCGTCGCT GGTGGACACC ACCGCCAATG ACTATCTGCA GGAAGTTGGC
GTGAACCTGG GTTCCCCGGG TGCCGAAACG CACGGTGGCG GCGATGTGAT GCTGTTCTCC
ACCGGCCCCG GCAGCGCGCC GTTGAAGGGC ACCCTCGACA ACACCAAGGT GTTCGGTGTG
GTCAAGTCGG CCCTGGGTCT CTGA
 
Protein sequence
MKITTRIGML AAAAASACLT MPAAQAAGEA KNVIFFLGDG MGPATVTASR IYKYGESGKL 
TMESLKRTAR IKTFSNDAQT TDSAPSMAAY MTGVKMNNEV ISMSPDTKAT APGTDVNGNK
TINNCLPTNG TSVPTLLELA KARGKATGAI TTTELTHATP AATYSHICHR DAQYDIAAQA
VPGGAGFNTA LGDGVDVLMG GGRNHWTPFD ATANKKGRAD GRNLLTEFAA KGYAVAATRD
QMMQASGNKL IGLFSTTSHL EYEIDRVAGK GEGATQPSLA DMTAKAIELL SKNGNGYFLM
VEGGRIDHAL HGTNAKRALE DTIAFDDAIK RALSMVDLSN TIIVVTADHD HTMTINGYSH
RGNPILATAT DYKTKKTALA ADGLPYTTLV FGNGGTPRKA TRDNPSLVDT TANDYLQEVG
VNLGSPGAET HGGGDVMLFS TGPGSAPLKG TLDNTKVFGV VKSALGL