| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4053 |
|---|
| Symbol | |
|---|
| ID | 4040911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 619270 |
|---|
| End bp | 620355 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979477 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586190 |
|---|
| Protein GI | 94312981 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.920687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAT CACCCGGTCT GTATCACAAG ACGTTCCTGC TGTTGCTCGC GGCGGTCTCC
ATCGCGTTCT TCTGGATTCT GCTGCCCTTC TATGGCGCCG TTTTCTGGGG CGCCGTCCTC
GCCATCATCT TCGCCCCGCT GCAACGGCGC CTGACGGCTG GGCTGCGTGG GCGCAACAAC
GTGGCCGCGC TGCTCACGCT GCTGCTCGTG CTAGTGCTGG TCATCCTGCC GCTGACGATC
ATCACCGCCT CGCTGATCAA CCAGGGCGTC AGCCTCTACG ACAGCATACG CTCGGGCCAA
CTGAATTTCG GCGTGTACTT TCAGCGCGCC GTGGACGCCC TGCCGCCCTA CGTGCGCACG
CTGCTGGCGA AGGTGGATCT GACCAGCATT GCGGACTTGC AGGAAAAGCT GAGCGCCAGC
GCGTTGCAGG CCAGCCAGTT CGTGGCTACG CGGGCGCTGA GCATCGGCCA GAATACGGCC
CAGTTCGTGA TCAGCTTCGG CATCATGCTG TACCTGCTGT TCTTCCTGCT GCGCGACGGC
CCGCGGCTGT CCCGCAAGAT CCGCACGGCC GTGCCGCTCA GCGATTTGTA CAAGCAGCAC
CTGATCCAGA AGTTCACCAC CGTGGTACGC GCCACCGTGA AGGGCAACGT GGCTGTGGCA
CTTGTGCAGG GGACACTCGG CGGCGGCATC TTCGCGGTCC TTGGTATCCA GGGCGCGCTG
CTCTGGGGCG TGATCATGGC GTTCCTGTCA CTGCTGCCCG CCGTGGGCGC AGGTCTGATC
TGGGCGCCCG TCGCGGTCTA CTTCCTGCTG ACCGGATCGA CGGTCACGGG CCTGGTGCTG
ATTGGGTTCG GCGTGCTGGT GATCGGCATG GTCGACAACG TGCTGCGCCC GATCCTGGTT
GGCAAGGACA CCCAGATGCC GGACTACGTG GTGCTGATCT CCACGCTCGG CGGCATGGCG
CTGTTCGGGC TCAACGGCTT CGTCATTGGG CCGCTGATCG CCGCGCTGTT CATCGCCTGT
TGGGACCTGA ACGCCCACGG TATCGACGAG AACGGCGATA TCGGCAGCAA CGGCCCCGCC
GCCTGA
|
|---|
| Protein sequence | MAESPGLYHK TFLLLLAAVS IAFFWILLPF YGAVFWGAVL AIIFAPLQRR LTAGLRGRNN
VAALLTLLLV LVLVILPLTI ITASLINQGV SLYDSIRSGQ LNFGVYFQRA VDALPPYVRT
LLAKVDLTSI ADLQEKLSAS ALQASQFVAT RALSIGQNTA QFVISFGIML YLLFFLLRDG
PRLSRKIRTA VPLSDLYKQH LIQKFTTVVR ATVKGNVAVA LVQGTLGGGI FAVLGIQGAL
LWGVIMAFLS LLPAVGAGLI WAPVAVYFLL TGSTVTGLVL IGFGVLVIGM VDNVLRPILV
GKDTQMPDYV VLISTLGGMA LFGLNGFVIG PLIAALFIAC WDLNAHGIDE NGDIGSNGPA
A
|
|---|
| |