| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4015 |
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| Symbol | pcaB |
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| ID | 4040873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 584937 |
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| End bp | 586409 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637979439 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_586152 |
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| Protein GI | 94312943 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0773124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTGCA AGCAGGGCGC GGGGTTTCCC CCGTGCCCTG CTTTGCATGA CAATCGGCGC
ATTACCACCG GTTTGCCCCC ACCGACGATG CCCACGCTTT CTCGCCTGAC CGACCCGATG
TTCGGCAGTC CCGCCGTGCT CGAGGTCTTC TCCGATACTG GCACCGTACG CCGGATGCTC
GATGCCGAGG CCGCGCTCGC GCGTGCCGAA GCGCAGTGCG GCGTGATTCC CGCCACTGCC
GCCGCCGTCA TTACTGAAGT CTGCGGCAGG GTCGATGTGA TCGACCTCGA GGCGCTGGCG
CAGGCGGCAG TATCCGCCGG CAATCTCGCC ATCCCGTTCG TCAAGCAATT AACTGCAGCC
GTCACCCAGC GCGACGCCGA CGCTGGCCGC TACGTGCATT GGGGCGCAAC CAGCCAGGAC
ATCATCGATA CCGCGCTCGT GCTGCAACTG CGCGATGCCC TGCGCGAGAT CGTCGTCGAT
TTGCTGCGCG CGGGCGATGC CTGCGCGACG CTGGCCGCGA CCCATCGCGC CACGCCCATG
GTGGCACGCA CATGGCTGCA ACATGCGCTG CCCACCACGT TTGGCTGCAA GGCCGGCGGC
TGGCTCGATG CCTTGCGTCG CGATCTGACG CGGCTAGACC ACGTTGGGGC GCAGGTCCGC
GTGATCCAGT TCGGTGGCGC CGCCGGCACC CTTGCCAGCC TGGGCGATGA CGCGCCGGCC
GTGGCGGCCC GCTTCGCCGC CGAACTCCAG CTCGATGTGC CCGCGCTGCC GTGGCACGCG
CATCGCGATC GTCTGGTCGA AGTGGCCACC GCGCTCGGTA TGTTGACCGG CACGCTGGGC
AAGATGGCAC GCGACGTCTC GCTGATGATG CAGACCGAGG TTGGCGAGGT AGCCGAGCCA
TCTGGCCCGG GACGCGGTGG ATCGAGCACG ATGCCCCACA AGCGCAACCC GGTGGGATGC
GCGGCGGTGC TGACCGCGGC GACGCGTGTG CCACCGCTGG TGGCGACGAT GCTTGCGGGC
ATGACGCAGG AGCATGAGCG TGCGCTCGGT GGCTGGCAGG CCGAATGGGA CACGCTGCCG
CAGATCGTCA CGCTGGCGGC AGGCGCGCTG CGCCAGATGG CAGACGTCGC GTCCGGGCTG
GAGGTCGATG AGGCCCGTAT GCGCGCGAAC CTCGATATCA CGCACGGCCT GATCCTCGGT
GAGGCAACCA TGCTCGAACT GGGGCGGCGC ATCGGCCGGT TGCAGGCTCA CCATCTCGTG
GAGCAGGCTT CGCGCCGCGC GGCGGCGGAA GACACCACGC TGCGTATCGC GCTGGCCCGC
ACGCTGGCCG AAGATGCGAA TCACGCGGGA TTGCTCGACG ACGCCGCGCT CGACCGACTG
AGCGATCCGG CGCAGTACGC TGGACAATCC GAACGTTTCA CCGATGCCGC CGTTGCCGCA
TGGCAGGCGC TACGCGCGAA CCCACAGAAC TAA
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| Protein sequence | MHCKQGAGFP PCPALHDNRR ITTGLPPPTM PTLSRLTDPM FGSPAVLEVF SDTGTVRRML
DAEAALARAE AQCGVIPATA AAVITEVCGR VDVIDLEALA QAAVSAGNLA IPFVKQLTAA
VTQRDADAGR YVHWGATSQD IIDTALVLQL RDALREIVVD LLRAGDACAT LAATHRATPM
VARTWLQHAL PTTFGCKAGG WLDALRRDLT RLDHVGAQVR VIQFGGAAGT LASLGDDAPA
VAARFAAELQ LDVPALPWHA HRDRLVEVAT ALGMLTGTLG KMARDVSLMM QTEVGEVAEP
SGPGRGGSST MPHKRNPVGC AAVLTAATRV PPLVATMLAG MTQEHERALG GWQAEWDTLP
QIVTLAAGAL RQMADVASGL EVDEARMRAN LDITHGLILG EATMLELGRR IGRLQAHHLV
EQASRRAAAE DTTLRIALAR TLAEDANHAG LLDDAALDRL SDPAQYAGQS ERFTDAAVAA
WQALRANPQN
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