Gene Rmet_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3970 
Symbol 
ID4040828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp534024 
End bp534776 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID637979394 
Productputative chemotaxis signal transduction protein CheW 
Protein accessionYP_586107 
Protein GI94312898 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000212039 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0041707 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGAAC CGAATTCATT GTTGCCCCAT GCCGCCCCGG CAGGCGCCAT CGACGACTGC 
TGGCGCCGCA TCGGCGTGAC CGGCGACCGC ACCTGCCCGC TACTCGCCAC GCACATCACC
TGCAGGAATT GCCCGGTCTA CGCCCAGGCC GCCTTGGTGT TGCTCGACAC ACTGGCAATC
GACCCGATCG TCCAGCCTGC CAGCGATAGC GATACGCCCA TCGACCAATC GTCAGCCGAC
CGGCTGGCCG GAGAGTCGTA CATGGTGTTC CGCGTCGGCG ACGAATGGCT GGCCTTGCCG
ACGGCCACGC TCGGCGAAGT CACTGCGCCC GCACTGGTCC ACTCGCTGCC GCATCGGCGC
CATGCCGCGC TGATCGGGGT AGCGGCCGTG CGCGGCGCGC TGCTGACGTG CATCTCGCTG
GCGCTGCTGT TTGGCGAATC GGCCGAACCC ACTGAATCCA CTGAATCCAC TGAATCCACT
GAATCCACTG AATCCAACGG GCGTGGCGGC CAGGATGCCC AGCGCGCGGC GCGCTTCCTG
ATTCTTGGCC AGGGACGCAA TGCGATCGCG CTGCCCGTTG CCGAGGTAGC CGGCGTCGAG
CGCGTCACGC AGGATGTCTT GCTGCCCTTG CCGGCGACGC TCGCGCGCGC CTCCGCCCGC
TATTCACGCG CGCTGTTCGA TTTCAACGGC CACAGCGTCG GTCTGCTTGA TGCCGACCTG
CTGCGGCAGG CGTTGACCCG GAGCCTGTCA TGA
 
Protein sequence
MAEPNSLLPH AAPAGAIDDC WRRIGVTGDR TCPLLATHIT CRNCPVYAQA ALVLLDTLAI 
DPIVQPASDS DTPIDQSSAD RLAGESYMVF RVGDEWLALP TATLGEVTAP ALVHSLPHRR
HAALIGVAAV RGALLTCISL ALLFGESAEP TESTESTEST ESTESNGRGG QDAQRAARFL
ILGQGRNAIA LPVAEVAGVE RVTQDVLLPL PATLARASAR YSRALFDFNG HSVGLLDADL
LRQALTRSLS