| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3969 |
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| Symbol | |
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| ID | 4040827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 531721 |
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| End bp | 534027 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979393 |
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| Product | signal transduction histidine kinase (cheA) |
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| Protein accession | YP_586106 |
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| Protein GI | 94312897 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00140745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.014071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGG AACAGCTCCG TGATGCCTCG TTGCTGGACC TGTTCGCGCT CGAAGCCGAC
GCGCAGGCCG ATGTGCTCAA TGCCGGCCTG CTGGCCCTGG AGCGCGATCC CACGGCAGCC
GTCCAGCTCG AGGCATGCAT GCGCGCCGCG CATTCGCTAA AAGGGGCCGC GCGCATCGTC
GGGCTCGAAG GTGGCGTGCG CGTTGCGCAT GTGATGGAGG ATTGCCTCGT CGCCGCGCAA
CGTGGCGGCC TTCTGCTGAG CGCCTCCCAT ATCGATGCAC TGCTGCAAGG CACTGACCTG
CTGCAGCGAA TCGGCCATCC GCCCGATGGC AACGCCAATT GGCCGGAGCT TGGCGGCAAG
GCAGAGATCG ACGCTTTCGT CGCCCGTCTC GAGGCGCTGC TCGATGGCGG CGCGGATGTG
GCGGCACTGG CAGCACCGAC AGTGTTGCCG CCGGCCGCCG AGCCCGCGCC GCCGGAGCCC
CCGTTACCCA CGGTCAATCA CCCGTCAACG AGCACCGTCG TCCCGGCGCA GCCACAGGAG
TACACCGGCA GCAACCAGGA ACGCATCCTG CGCGTCAATG CCGAACGGCT GGACCGGCTG
CTGGCGATGG CCGGCGAGTC GATGGTGGAG ACGCATTGGC TACGGCCGTT CGGAGTTGCG
ATCCAGCAGG CCAGGCGTCA ACAGATGCGC GTGATGCAGG CGCTCGATGG CGTTCAGGCG
CTGCTCGACA GCCCCGATAG CACCGTGCCA CGCCTGCGGG CGGCACTGAT GGAGACTCGC
CAACTGCTTG AGGACAGCCA CGGCCAACTC ACCCAGCGCG TGGAGGAATT CGACCAGTAC
GATCACCGCC AAAGTGGACT GTCGCGCCGC CTGTACGACA CGGCGCTGTC GTGCCGGATG
CGCCCACTGG CCGATGGCAT CACCGGCTAC TCGCGCATGG TGCGCGACCT GGGCCGCTCG
CTCGGCAAGC GTGTCCGACT GGAGTTGTCC GGCGAGCAAA CCCAGGTCGA CCGGGACATC
CTGGAGCATC TCGACGCGCC GCTGGCTCAC CTGCTGCGCA ATGCCGTGGA TCATGGCATC
GAAGCGCCGG ACACGCGCCG CGCCGCCGGC AAGCCGGAAG AAGGCCGCGT ATCACTCCAT
GCGTGGCACA ACGCCGGCCG GCTTGTGATC GAGATCTTCG ATGACGGCGC GGGCGTCGAT
CTGGAAGCGT TGCGCGCCGC CATCGTGCGG CGAGGCCTCG CCCAGGCGGA CACCGTCGCG
CGGCTATCGC AAGCCGAATT GCTCGAGTTC CTGCTGCTGC CGGGTTTCAG CATGCGCGAG
ACCGTTTCCG AGGTCTCCGG CCGCGGTGTC GGGCTCGACG CCGTGCAGGA CATGGTGCGT
GCCGTGCGGG GCAGCCTGAG GCTTTCCCAG CAGCCTGGCA GCGGCCTGCA CTTCCATCTC
GAGTTGCCCC TGACGCTGTC GATCGTGCGG GCGCTGCTCG TGGAAATATC GGGCGAAGCC
TATGCCTTCC CGCTGGGCCA CGTGCTGCGT GCCGTGGCCG TGCGCCGCGA AGACATCGAA
CAGACCGAGC AGCACCAGCA CTTCCGCCAC GATGGCAAGC CGGTGGGGCT GATCAGCGCC
GCGCAGGTGC TCCAGCGTCC CGAGCGTGGC CAGGATGGAG ATACCGTTCC CGTGGTCGTC
ATCGGCGAGC AGGATCGTGT GTATGGCATC GCAGTGGATC GCCTGATCGG CGAGCGATTG
CTGGTGGTGC AGCCACTCGC GCAGGCCCTC GGCAAGATCA AGGACATCGC GGCGGGCAGC
CTGACCGACG ATGGCATGCC GGTCCTGATC TTCGACGTCG AGGACATGCT GCGGTCGGTG
GAGAAACTCG TCTCCGATGG CCGCATCGAA CGGGTGCGCC ACGGCGGCGA GGAAGCCACC
CAGACGCGAC GCAAGCGCGT GCTGGTGGTG GATGACTCGC TGACCGTGCG GGAACTGGAG
CGCAAGCTGC TGAGCGGACG CGGCTACGAC GTGGCCGTCG CGGTGGACGG CATGGATGGA
TGGAACGTGC TCCGCGCGGA ATCGTTCGAT CTGGTGATCA CCGACGTCGA CATGCCACGC
ATGGACGGCA TTGAACTCGT CAGCCGGATA CGAGGCGATA CCCGCCTGAC GCATCTCCCC
GTGATGATCG TCTCTTACAA GGACCGCGAG CAGGATCGCG AGCGCGGCCT GCAGGCTGGC
GCGGATTACT ATCTGGCCAA AGGCAGCTTC CACGATACCG CGCTGCTCGA CGCGGTACGT
GACCTGATCG GCGAGGCACG CTCATGA
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| Protein sequence | MNPEQLRDAS LLDLFALEAD AQADVLNAGL LALERDPTAA VQLEACMRAA HSLKGAARIV
GLEGGVRVAH VMEDCLVAAQ RGGLLLSASH IDALLQGTDL LQRIGHPPDG NANWPELGGK
AEIDAFVARL EALLDGGADV AALAAPTVLP PAAEPAPPEP PLPTVNHPST STVVPAQPQE
YTGSNQERIL RVNAERLDRL LAMAGESMVE THWLRPFGVA IQQARRQQMR VMQALDGVQA
LLDSPDSTVP RLRAALMETR QLLEDSHGQL TQRVEEFDQY DHRQSGLSRR LYDTALSCRM
RPLADGITGY SRMVRDLGRS LGKRVRLELS GEQTQVDRDI LEHLDAPLAH LLRNAVDHGI
EAPDTRRAAG KPEEGRVSLH AWHNAGRLVI EIFDDGAGVD LEALRAAIVR RGLAQADTVA
RLSQAELLEF LLLPGFSMRE TVSEVSGRGV GLDAVQDMVR AVRGSLRLSQ QPGSGLHFHL
ELPLTLSIVR ALLVEISGEA YAFPLGHVLR AVAVRREDIE QTEQHQHFRH DGKPVGLISA
AQVLQRPERG QDGDTVPVVV IGEQDRVYGI AVDRLIGERL LVVQPLAQAL GKIKDIAAGS
LTDDGMPVLI FDVEDMLRSV EKLVSDGRIE RVRHGGEEAT QTRRKRVLVV DDSLTVRELE
RKLLSGRGYD VAVAVDGMDG WNVLRAESFD LVITDVDMPR MDGIELVSRI RGDTRLTHLP
VMIVSYKDRE QDRERGLQAG ADYYLAKGSF HDTALLDAVR DLIGEARS
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