| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3962 |
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| Symbol | |
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| ID | 4040820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 522170 |
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| End bp | 523648 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979386 |
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| Product | multi antimicrobial extrusion protein |
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| Protein accession | YP_586099 |
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| Protein GI | 94312890 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.789789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0338284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTG ACGCCAGACT GACCACCGGC CCGATCGGCC GCACGCTGCT GATGTTCTCG
CTGCCGGTGC TTGGCAGCAA CATCCTGCAG TCGCTCAACG CCTCGATCAA TTCGGTCTGG
GTCGGCCGAT ACCTTGGTGA GGCGGCGCTC ACGGCCACGT CGAACGCCAA CATCATTCTG
TTTTTCCTGC TCGGCGTGGT GTTCGGGATC AGCATGGCCA ATACGATCAT GATCGGCCAG
GCAGTCGGCG GGCGTGACAT CGAAGAGGCG CGACGCGTGG TGGGCACCAG CACCACGTTC
TTCGTCGGTC TGTCGGTGCT GGCCGCCGTG CTGGGCTTTG TCTTCACGCC GCATATCCTG
GCCGCGATGC ATACGCCGGA CGATGCCACG CCGCTGGCCA TCATCTACCT GCGCATCATC
TTCATCGCGC TGCCGTTCAT GTACTTCTAC AACTTCGTGA TGATGACGCT GCGCGGCGCC
GGTGACTCGC GCACGCCGTT CTACTTCATG TTGCTGTCGG TGGTGCTGGA CGTCGTGCTG
AATCCCGTGC TGATCTTCGG GGTAGGCCCG ATTCCCCCGC TCGGCATCGC GGGCTCGGCG
CTCGCCACGC TGATTGCGCA ACTGACCAGC CTGGCGGCGA TGATCGGGTT GCTGTACCGG
CGCCGGCACT TCCTGCTGCT GCACCGGGAG CAACTTGCGC TGCTCCGGCC GGACATGGCT
ATCCTGCGCG CGCTGGTGAT GAAGGGGCTG CCGATGGGCC TGCAGATGGT GGTGATCTCG
TCGTCGGCCA TCGTGATGAT GTCGCTGGTC AATACGTACG GCTCGCGGAC GACCGCGGCC
TACGGTGTGG CATCGCAGCT CTGGACCTAT GTGCAGATGC CGGCTCTGGC TGTTGGCGCC
AGTGTGTCAT CGATGGTTGC GCAGAACGTA GGGGCGGGAT TGTGGGTGCG TGTGGCGCGT
GTCACGCAGG TTGGCATGCT CTTCAACATG TTGATGACCG GCGCGCTGGT GGCGCTGGTC
TATGTATTCA ATCGTCACTC GCTTGGTCTG TTCCTGGGGG AGGACAGCGT CGCGATCGAG
ATTGCTCAGC ACATCAACAA CGTGGTGCTG TGGTCGTTCA TCCTGTTCGG CTTCACCATT
GTCGTGTTCG GCGCCGTGCG CGCCACGGGC GCCGTCATGG CGCCGCTGGT CATTCTGTTC
GTGTCGATGT GGCTGATCCG GCTGCCGTTC GCGTGGCTGC TCGGCCCGCA CATCGGCGCC
GAATCGATCT GGTGGAGCTT CCCGCTCGGC TCGGTGGTGT CGGTGCTGCT TTCGTTTGGC
TACTACCGAT ATGGCAATTG GCGCCGCAGC CATATCCTGC CGGTCGCGCC ACATCCGGAA
GCGGTGGGGA ATGCACCCGA TACCAGCATG GGTGTGCCAT GCGAGGATGC CGATGCGGGC
GCGGAAGCCG ATGAGGGAGT CGCACGACAA CCTTCCTAA
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| Protein sequence | MKPDARLTTG PIGRTLLMFS LPVLGSNILQ SLNASINSVW VGRYLGEAAL TATSNANIIL
FFLLGVVFGI SMANTIMIGQ AVGGRDIEEA RRVVGTSTTF FVGLSVLAAV LGFVFTPHIL
AAMHTPDDAT PLAIIYLRII FIALPFMYFY NFVMMTLRGA GDSRTPFYFM LLSVVLDVVL
NPVLIFGVGP IPPLGIAGSA LATLIAQLTS LAAMIGLLYR RRHFLLLHRE QLALLRPDMA
ILRALVMKGL PMGLQMVVIS SSAIVMMSLV NTYGSRTTAA YGVASQLWTY VQMPALAVGA
SVSSMVAQNV GAGLWVRVAR VTQVGMLFNM LMTGALVALV YVFNRHSLGL FLGEDSVAIE
IAQHINNVVL WSFILFGFTI VVFGAVRATG AVMAPLVILF VSMWLIRLPF AWLLGPHIGA
ESIWWSFPLG SVVSVLLSFG YYRYGNWRRS HILPVAPHPE AVGNAPDTSM GVPCEDADAG
AEADEGVARQ PS
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