| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3961 |
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| Symbol | gabD |
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| ID | 4040819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 520510 |
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| End bp | 521937 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979385 |
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| Product | succinate-semialdehyde dehydrogenase |
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| Protein accession | YP_586098 |
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| Protein GI | 94312889 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0708949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0170918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCAGG ATCTCGCCCT CTACATCGAT GGAGAATTCA TCAAGGGAGG CGACCGCCGC
GAGCAGGACG TCATCAACCC GGCGACGCAG GAACTGCTCG GCAAGCTGCC ACACGCCACC
ACTGCCGACC TGGATCGTGC GCTGTCTGCC GCGCAGCGCG CCTTCGAAAC CTGGAAGAAA
ACGTCGCCGC TGGAACGCTC GCAGATCCTG CGCCGCGTAG CAGAACTGAC CCGTACCCGC
GCCAAGGAAA TTGGCCGCGA CATCACGCTG GACCAGGGCA AGCCGCTGGC CGAAGCCGTG
GGCGAAGTGA TGATCTGCGC CGAACATGCC GAATGGCACG CCGAGGAATG TCGTCGTATC
TACGGCCGCG TGATTCCGCC GCGCAACCCG GCGGTGCGCC AGATCGTGGT GCGCGAGCCG
ATCGGCGTCT GCGCCGCGTT CACGCCTTGG AACTTCCCGT TCAACCAGGC CATCCGCAAG
ATCGTGGCTG CGCTGGGCGC CGGCTGCACG CTGATCCTGA AAGGTCCGGA AGACTCCCCG
AGCGCCGTGG TGGCGCTGGC CCGCCTGTTC CACGATGCAG GCCTGCCCCC GGGCGTGCTG
AATATCGTAT GGGGCGTGCC GAGCGAAGTT TCGACCTATC TGATCGAATC ACCGATCGTG
CGCAAGATCT CGTTCACCGG CTCGGTACCG GTGGGCAAGC AGCTTGCCGC GATGGCCGGC
GCGCACATGA AGCGCGTGAC GATGGAGTTG GGCGGCCACT CGCCCGTGCT GGTGTTTGGC
GACGCAGACA TCGAACCGGC CGCGGAAATG CTGGCCCGCT TCAAGCTGCG CAATGCCGGC
CAGGTTTGCG TATCGCCCAC GCGTTTCTAT GTTCAGGAAA AGGCCTACGA CAAATTCCTG
GCGCGCTTCA CCGAGGTCAT CGGCTCGATC AAGGTCGGCA ACGGCCTGGA CGACGGCACC
CAGATGGGCC CGCTCGCACA CGAACGCCGC ATCGCGTCGA TGGAGCAGTT CCTGGACGAT
GCCAGCCATC GCGGCGGCAA GATCGTCGCC GGCGGCTCGC GCATCGGCGA CAAGGGCTTC
TTCTTCGCGC CGACCGTCGT CACGGACCTG CCCGACGATG CCAAGCTGAT GGTCGATGAA
CCGTTCGGCC CGGTAGCCCC GGTCACGCGC TTCAAGGATG CGGAAGAAGT GCTGCGCCGC
GCCAACAGCC TGCCGTTCGG CCTGGCCTCG TATGTCTTCA CCAACTCTCT GAAGACGGCC
AACCTTGTAT CGAACGGACT TGAAGCCGGC ATGGTCAACA TCAACCACTT CGGCATGGCG
CTGGCCGAGA CCCCGTTTGG CGGCATCAAG GATTCGGGAA TCGGCAGCGA AGGTGGCCAG
GAGACCTTCG ACGGTTACCT GGTGACCAAG TTTATTACCC AGGTTTGA
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| Protein sequence | MYQDLALYID GEFIKGGDRR EQDVINPATQ ELLGKLPHAT TADLDRALSA AQRAFETWKK
TSPLERSQIL RRVAELTRTR AKEIGRDITL DQGKPLAEAV GEVMICAEHA EWHAEECRRI
YGRVIPPRNP AVRQIVVREP IGVCAAFTPW NFPFNQAIRK IVAALGAGCT LILKGPEDSP
SAVVALARLF HDAGLPPGVL NIVWGVPSEV STYLIESPIV RKISFTGSVP VGKQLAAMAG
AHMKRVTMEL GGHSPVLVFG DADIEPAAEM LARFKLRNAG QVCVSPTRFY VQEKAYDKFL
ARFTEVIGSI KVGNGLDDGT QMGPLAHERR IASMEQFLDD ASHRGGKIVA GGSRIGDKGF
FFAPTVVTDL PDDAKLMVDE PFGPVAPVTR FKDAEEVLRR ANSLPFGLAS YVFTNSLKTA
NLVSNGLEAG MVNINHFGMA LAETPFGGIK DSGIGSEGGQ ETFDGYLVTK FITQV
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